Final Multiqc Report
https://github.com/Daylily-Informatics/daylily (BRANCH:* main) (TAG:0.7.159) (HASH:483e8f1)
- Project/Budget
- Budget @ Runtime
- $ of $ spent ( %)
- Spot Instances
- Spot Costs per hr
- median: $0.00 mean: $0.00 ( avg cost per vcpu,per min: $0 )
- FQ->BAM.sort avg Costs
- strobe.alNsort: $0.00, sent.alNsort: $0.00, bwa2a.alNsort: $0.00
- BAM mrkdup avg Cost
- 13.27 min, costing $0.00
- Results Dir (GB)
- 917G
Report generated on 2025-01-29, 14:44 UTC based on data in:
/home/ubuntu/mounts/s3/FSxLustre20250123T214325Z/analysis_results/ubuntu/hg38/remaining/daylily/results/day/hg38/logs/home/ubuntu/mounts/s3/FSxLustre20250123T214325Z/analysis_results/ubuntu/hg38/remaining/daylily/results/day/hg38
General Statistics
Showing 0/652 rows and 37/77 columns.
| Sample Name | Contamination (S) | Family ID | Ancestry | P(Ancestry) | Sex / Het Ratio | Correct Sex | Sex | Dups | GC | Avg len | Median len | Failed | Seqs | Vars | SNP | Indel | Ts/Tv | MNP | Multiallelic | Multiallelic SNP | Error rate | Non-primary | Reads mapped | % Mapped | % Proper pairs | % MapQ 0 reads | Total seqs | Mean insert | Reads | Reads mapped | % Reads mapped | Insert Size | Mean Insert Size | M Reads | % GC | Ins. size | ≥ 1X | ≥ 5X | ≥ 10X | ≥ 30X | ≥ 50X | Median cov | Mean cov | Error rate | % Aligned | M Aligned | M Total reads | ≥ 1X | ≥ 5X | ≥ 10X | ≥ 30X | ≥ 50X | Median | Mean Cov. | Min Cov. | Max Cov. | Mb Total Coverage Bases | Genome length | Dups | GC | Avg len | Median len | Failed | Seqs | Vars | SNP | Indel | Ts/Tv | MNP | Multiallelic | Multiallelic SNP | InsertSizeMean | InsertSizeMedian | InsertSizeMode | InsertSizeStandardDeviation | DuplicateReadsPct | ChimericReadPairPct |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| HG001.novaseq.pcr-free.30x.R1 | 12.2% | 41.0% | 151bp | 151bp | 0% | 361.1M | 12.2% | 41.0% | 151bp | 151bp | 0% | 361.1M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG001.novaseq.pcr-free.30x.R2 | 11.9% | 41.0% | 151bp | 151bp | 0% | 361.1M | 11.9% | 41.0% | 151bp | 151bp | 0% | 361.1M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG002.novaseq.pcr-free.30x.R1 | 12.2% | 41.0% | 151bp | 151bp | 0% | 355.8M | 12.2% | 41.0% | 151bp | 151bp | 0% | 355.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG002.novaseq.pcr-free.30x.R2 | 11.7% | 41.0% | 151bp | 151bp | 0% | 355.8M | 11.7% | 41.0% | 151bp | 151bp | 0% | 355.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG003.novaseq.pcr-free.30x.R1 | 12.3% | 41.0% | 151bp | 151bp | 0% | 359.3M | 12.3% | 41.0% | 151bp | 151bp | 0% | 359.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG003.novaseq.pcr-free.30x.R2 | 12.0% | 41.0% | 151bp | 151bp | 0% | 359.3M | 12.0% | 41.0% | 151bp | 151bp | 0% | 359.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG004.novaseq.pcr-free.30x.R1 | 12.2% | 41.0% | 151bp | 151bp | 0% | 360.3M | 12.2% | 41.0% | 151bp | 151bp | 0% | 360.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG004.novaseq.pcr-free.30x.R2 | 12.0% | 41.0% | 151bp | 151bp | 0% | 360.3M | 12.0% | 41.0% | 151bp | 151bp | 0% | 360.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG005.novaseq.pcr-free.30x.R1 | 12.8% | 41.0% | 151bp | 151bp | 0% | 362.9M | 12.8% | 41.0% | 151bp | 151bp | 0% | 362.9M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG005.novaseq.pcr-free.30x.R2 | 12.6% | 41.0% | 151bp | 151bp | 0% | 362.9M | 12.6% | 41.0% | 151bp | 151bp | 0% | 362.9M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG006.novaseq.pcr-free.30x.R1 | 0.2% | 43.0% | 151bp | 151bp | 0% | 360.0M | 0.2% | 43.0% | 151bp | 151bp | 0% | 360.0M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG006.novaseq.pcr-free.30x.R2 | 1.9% | 43.0% | 151bp | 151bp | 18% | 360.0M | 1.9% | 43.0% | 151bp | 151bp | 18% | 360.0M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG007.novaseq.pcr-free.30x.R1 | 0.1% | 43.0% | 151bp | 151bp | 0% | 363.8M | 0.1% | 43.0% | 151bp | 151bp | 0% | 363.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HG007.novaseq.pcr-free.30x.R2 | 1.8% | 43.0% | 151bp | 151bp | 18% | 363.8M | 1.8% | 43.0% | 151bp | 151bp | 18% | 363.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0 | 0.850% | RIH0_ANA0-HG001-19_DBC0_0 | EUR | 0.7 | 1.7 | True | female | 42% | 369 | 93.9% | 93.5% | 93.2% | 71.1% | 4.8% | 34X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.clair3.snv.sort | 4,982,613 | 4,051,402 | 936,411 | 1.95 | 0 | 90,787 | 1,697 | 4,982,613 | 4,051,402 | 936,411 | 1.95 | 0 | 90,787 | 1,697 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.deep.snv.sort | 7,984,448 | 6,691,034 | 1,298,889 | 0.80 | 0 | 89,072 | 2,154 | 7,984,448 | 6,691,034 | 1,298,889 | 0.80 | 0 | 89,072 | 2,154 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,925,955 | 3,925,955 | 0 | 2.00 | 0 | 0 | 0 | 3,925,955 | 3,925,955 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr1 | 92.0% | 91.0% | 90.0% | 58.0% | 1.0% | 31X | 30.2X | 0.0X | 63,990.0X | 7,516.8Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 233,562.0X | 7,591.7Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 125,514.0X | 6,217.7Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 0.0% | 30X | 30.9X | 0.0X | 66,913.0X | 5,868.5Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 30.9X | 0.0X | 57,026.0X | 5,610.7Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 99.0% | 98.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 1,715.0X | 5,309.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 30.7X | 0.0X | 3,312.0X | 4,890.3Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 98.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 1,335.0X | 4,464.9Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 84.0% | 83.0% | 54.0% | 2.0% | 30X | 27.3X | 0.0X | 3,417.0X | 3,777.7Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 20,807.0X | 4,232.9Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 32X | 31.2X | 0.0X | 829.0X | 4,209.0Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 45,470.0X | 4,195.3Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 26.5X | 0.0X | 11,160.0X | 3,032.0Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 82.0% | 51.0% | 1.0% | 30X | 26.2X | 0.0X | 4,013.0X | 2,800.7Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 78.0% | 51.0% | 1.0% | 30X | 25.3X | 0.0X | 6,176.0X | 2,578.9Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 57.0% | 2.0% | 31X | 30.7X | 0.0X | 41,805.0X | 2,771.5Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 94.0% | 66.0% | 2.0% | 33X | 32.0X | 0.0X | 30,437.0X | 2,663.0Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 94.0% | 94.0% | 55.0% | 1.0% | 31X | 29.6X | 0.0X | 28,138.0X | 2,381.1Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.9X | 0.0X | 1,156.0X | 1,867.5Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 65.0% | 2.0% | 32X | 32.1X | 0.0X | 6,438.0X | 2,072.0Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 25.3X | 0.0X | 15,451.0X | 1,181.2Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 2.0% | 30X | 24.2X | 0.0X | 3,426.0X | 1,230.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.mrkdup.sort | 372bp | 409bp | 2.0M | 34.7X | 0.57% | 99.6% | 719.8M | 722.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.oct.snv.sort | 4,998,937 | 3,936,469 | 1,063,249 | 2.00 | 181 | 120,593 | 1,496 | 4,998,937 | 3,936,469 | 1,063,249 | 2.00 | 181 | 120,593 | 1,496 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.sentd.snv.sort | 5,859,418 | 4,804,193 | 1,061,990 | 1.69 | 0 | 89,509 | 4,214 | 5,859,418 | 4,804,193 | 1,061,990 | 1.69 | 0 | 89,509 | 4,214 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.bwa2a.st | 0.57% | 4.1M | 719.8M | 99.6% | 97.7% | 4.5% | 722.3M | 403.5bp | 726.4M | 723.9M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.md | 94.0% | 94.0% | 94.0% | 67.0% | 1.0% | 31X | 31.0X | 0.0X | 307,855.0X | 96,174.9Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.clair3.snv.sort | 5,645,316 | 4,087,342 | 934,866 | 1.93 | 0 | 89,889 | 1,680 | 5,645,316 | 4,087,342 | 934,866 | 1.93 | 0 | 89,889 | 1,680 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.deep.snv.sort | 8,071,136 | 6,769,947 | 1,306,687 | 0.80 | 0 | 89,163 | 2,231 | 8,071,136 | 6,769,947 | 1,306,687 | 0.80 | 0 | 89,163 | 2,231 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.lfq2.snv.sort | 3,938,021 | 3,938,021 | 0 | 2.00 | 0 | 0 | 0 | 3,938,021 | 3,938,021 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 90.0% | 58.0% | 1.0% | 31X | 30.4X | 0.0X | 64,139.0X | 7,561.0Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 229,101.0X | 7,607.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr3 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 124,729.0X | 6,221.1Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 0.0% | 30X | 30.9X | 0.0X | 45,768.0X | 5,878.2Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 30.9X | 0.0X | 45,539.0X | 5,617.4Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr6 | 99.0% | 99.0% | 98.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 2,073.0X | 5,311.8Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr7 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 30.7X | 0.0X | 2,832.0X | 4,896.9Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 98.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 1,241.0X | 4,467.6Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 83.0% | 54.0% | 2.0% | 30X | 27.3X | 0.0X | 3,515.0X | 3,783.4Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.8X | 0.0X | 35,099.0X | 4,250.2Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 32X | 31.2X | 0.0X | 1,101.0X | 4,218.6Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr12 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 41,722.0X | 4,200.6Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr13 | 85.0% | 85.0% | 85.0% | 48.0% | 1.0% | 29X | 26.7X | 0.0X | 11,092.0X | 3,053.3Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr14 | 82.0% | 82.0% | 82.0% | 51.0% | 1.0% | 30X | 26.2X | 0.0X | 6,182.0X | 2,801.6Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr15 | 80.0% | 79.0% | 78.0% | 51.0% | 1.0% | 30X | 25.3X | 0.0X | 12,731.0X | 2,581.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr16 | 88.0% | 86.0% | 85.0% | 57.0% | 2.0% | 31X | 30.7X | 0.0X | 41,903.0X | 2,774.0Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr17 | 95.0% | 94.0% | 94.0% | 66.0% | 2.0% | 33X | 32.1X | 0.0X | 31,652.0X | 2,669.9Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr18 | 97.0% | 95.0% | 94.0% | 55.0% | 1.0% | 31X | 29.7X | 0.0X | 27,450.0X | 2,387.6Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.9X | 0.0X | 1,143.0X | 1,868.0Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr20 | 98.0% | 96.0% | 96.0% | 65.0% | 2.0% | 32X | 32.2X | 0.0X | 4,958.0X | 2,077.3Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 25.3X | 0.0X | 18,003.0X | 1,182.5Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 2.0% | 30X | 24.2X | 0.0X | 3,924.0X | 1,231.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.mrkdup.sort | 372bp | 408bp | 2.0M | 34.6X | 0.57% | 99.6% | 719.7M | 722.3M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.oct.snv.sort | 5,020,415 | 3,956,371 | 1,064,814 | 1.99 | 182 | 120,654 | 1,480 | 5,020,415 | 3,956,371 | 1,064,814 | 1.99 | 182 | 120,654 | 1,480 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.sentd.snv.sort | 5,924,136 | 4,864,749 | 1,066,202 | 1.67 | 0 | 89,748 | 4,365 | 5,924,136 | 4,864,749 | 1,066,202 | 1.67 | 0 | 89,748 | 4,365 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.sent.st | 0.57% | 4.3M | 719.7M | 99.6% | 97.7% | 4.3% | 722.3M | 403.8bp | 726.6M | 724.0M | 99.6% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.clair3.snv.sort | 6,493,301 | 4,038,642 | 937,040 | 1.94 | 0 | 89,738 | 1,622 | 6,493,301 | 4,038,642 | 937,040 | 1.94 | 0 | 89,738 | 1,622 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.deep.snv.sort | 8,036,127 | 6,722,441 | 1,318,518 | 0.80 | 0 | 89,262 | 2,340 | 8,036,127 | 6,722,441 | 1,318,518 | 0.80 | 0 | 89,262 | 2,340 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.lfq2.snv.sort | 3,818,064 | 3,818,064 | 0 | 2.02 | 0 | 0 | 0 | 3,818,064 | 3,818,064 | 0 | 2.02 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 91.0% | 58.0% | 1.0% | 31X | 30.8X | 0.0X | 66,360.0X | 7,666.9Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 303,871.0X | 7,617.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr3 | 100.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 139,979.0X | 6,221.8Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 1.0% | 30X | 31.1X | 0.0X | 42,590.0X | 5,911.4Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 30.9X | 0.0X | 27,540.0X | 5,602.2Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr6 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 16,116.0X | 5,306.1Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 97.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 13,941.0X | 4,909.7Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 98.0% | 58.0% | 1.0% | 31X | 30.8X | 0.0X | 10,841.0X | 4,466.9Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr9 | 87.0% | 85.0% | 84.0% | 54.0% | 2.0% | 30X | 27.4X | 0.0X | 3,018.0X | 3,787.8Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 31X | 31.9X | 0.0X | 18,374.0X | 4,272.5Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr11 | 99.0% | 99.0% | 98.0% | 61.0% | 1.0% | 31X | 31.3X | 0.0X | 2,109.0X | 4,233.4Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 99.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 35,581.0X | 4,206.1Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr13 | 86.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 27.0X | 0.0X | 8,060.0X | 3,085.1Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 82.0% | 51.0% | 1.0% | 30X | 26.1X | 0.0X | 2,426.0X | 2,796.3Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 78.0% | 51.0% | 1.0% | 30X | 25.3X | 0.0X | 12,792.0X | 2,584.7Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 86.0% | 57.0% | 2.0% | 31X | 30.8X | 0.0X | 39,942.0X | 2,785.5Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 94.0% | 66.0% | 2.0% | 33X | 32.5X | 0.0X | 27,559.0X | 2,707.8Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 95.0% | 55.0% | 1.0% | 30X | 29.9X | 0.0X | 23,525.0X | 2,403.8Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.8X | 0.0X | 2,011.0X | 1,862.7Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr20 | 98.0% | 97.0% | 96.0% | 65.0% | 2.0% | 32X | 32.6X | 0.0X | 22,942.0X | 2,101.7Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr21 | 78.0% | 76.0% | 75.0% | 46.0% | 3.0% | 29X | 25.4X | 0.0X | 27,544.0X | 1,187.8Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 2.0% | 30X | 24.2X | 0.0X | 11,269.0X | 1,231.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.mrkdup.sort | 34.5X | 0.59% | 99.1% | 715.5M | 722.3M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.oct.snv.sort | 4,980,951 | 3,917,082 | 1,064,607 | 1.99 | 185 | 121,774 | 1,417 | 4,980,951 | 3,917,082 | 1,064,607 | 1.99 | 185 | 121,774 | 1,417 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.sentd.snv.sort | 5,879,870 | 4,817,482 | 1,069,286 | 1.67 | 0 | 90,281 | 4,511 | 5,879,870 | 4,817,482 | 1,069,286 | 1.67 | 0 | 90,281 | 4,511 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG001-19_DBC0_0.strobe.st | 0.59% | 159.0M | 715.5M | 99.1% | 96.6% | 3.4% | 722.3M | 407.6bp | 881.3M | 873.2M | 99.1% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0 | 0.577% | RIH0_ANA0-HG002-19_DBC0_0 | UNKNOWN | 0.6 | 0.3 | True | male | 42% | 376 | 94.5% | 94.2% | 93.6% | 67.6% | 4.9% | 34X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.clair3.snv.sort | 5,420,934 | 4,059,111 | 936,423 | 1.95 | 0 | 90,186 | 1,723 | 5,420,934 | 4,059,111 | 936,423 | 1.95 | 0 | 90,186 | 1,723 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.deep.snv.sort | 8,104,071 | 6,809,749 | 1,299,883 | 0.78 | 0 | 88,451 | 2,272 | 8,104,071 | 6,809,749 | 1,299,883 | 0.78 | 0 | 88,451 | 2,272 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,939,416 | 3,939,416 | 0 | 2.00 | 0 | 0 | 0 | 3,939,416 | 3,939,416 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr1 | 92.0% | 91.0% | 90.0% | 60.0% | 1.0% | 31X | 30.7X | 0.0X | 68,701.0X | 7,638.5Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 216,610.0X | 7,641.0Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 120,226.0X | 6,258.4Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 1.0% | 30X | 31.0X | 0.0X | 80,714.0X | 5,898.1Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 31.1X | 0.0X | 82,125.0X | 5,647.7Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 99.0% | 98.0% | 61.0% | 1.0% | 31X | 31.4X | 0.0X | 6,699.0X | 5,365.1Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 30.9X | 0.0X | 4,104.0X | 4,919.8Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 2,111.0X | 4,495.7Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr9 | 85.0% | 84.0% | 83.0% | 52.0% | 1.0% | 30X | 26.7X | 0.0X | 3,675.0X | 3,700.7Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 98.0% | 98.0% | 63.0% | 1.0% | 32X | 32.0X | 0.0X | 30,539.0X | 4,281.0Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.4X | 0.0X | 2,372.0X | 4,245.2Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 31.8X | 0.0X | 58,973.0X | 4,235.9Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 26.8X | 0.0X | 68,340.0X | 3,062.5Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr14 | 83.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.7X | 0.0X | 4,083.0X | 2,854.8Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.7X | 0.0X | 7,335.0X | 2,620.0Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 59.0% | 2.0% | 32X | 31.0X | 0.0X | 39,804.0X | 2,797.6Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 94.0% | 69.0% | 2.0% | 33X | 32.7X | 0.0X | 22,740.0X | 2,722.9Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 95.0% | 94.0% | 55.0% | 1.0% | 30X | 29.6X | 0.0X | 23,097.0X | 2,382.6Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 95.0% | 94.0% | 70.0% | 3.0% | 33X | 32.5X | 0.0X | 1,763.0X | 1,903.2Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 66.0% | 2.0% | 32X | 32.5X | 0.0X | 8,876.0X | 2,096.7Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 26.2X | 0.0X | 23,371.0X | 1,224.3Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 71.0% | 70.0% | 52.0% | 3.0% | 30X | 25.0X | 0.0X | 25,409.0X | 1,271.1Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.mrkdup.sort | 378bp | 414bp | 2.0M | 34.1X | 0.59% | 99.7% | 709.4M | 711.6M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.oct.snv.sort | 5,005,309 | 3,942,178 | 1,063,925 | 2.01 | 165 | 120,450 | 1,557 | 5,005,309 | 3,942,178 | 1,063,925 | 2.01 | 165 | 120,450 | 1,557 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.sentd.snv.sort | 5,904,350 | 4,848,159 | 1,062,852 | 1.68 | 0 | 88,889 | 4,085 | 5,904,350 | 4,848,159 | 1,062,852 | 1.68 | 0 | 88,889 | 4,085 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.bwa2a.st | 0.59% | 4.4M | 709.4M | 99.7% | 97.8% | 4.9% | 711.6M | 409.4bp | 715.9M | 713.8M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.md | 95.0% | 95.0% | 94.0% | 65.0% | 1.0% | 31X | 30.8X | 0.0X | 286,564.0X | 95,354.4Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.clair3.snv.sort | 5,033,907 | 4,099,191 | 939,930 | 1.93 | 0 | 90,789 | 1,751 | 5,033,907 | 4,099,191 | 939,930 | 1.93 | 0 | 90,789 | 1,751 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.deep.snv.sort | 8,188,973 | 6,886,242 | 1,308,305 | 0.78 | 0 | 88,556 | 2,320 | 8,188,973 | 6,886,242 | 1,308,305 | 0.78 | 0 | 88,556 | 2,320 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.lfq2.snv.sort | 3,952,118 | 3,952,118 | 0 | 1.99 | 0 | 0 | 0 | 3,952,118 | 3,952,118 | 0 | 1.99 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 90.0% | 60.0% | 1.0% | 31X | 30.9X | 0.0X | 68,929.0X | 7,693.6Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 31X | 31.6X | 0.0X | 211,979.0X | 7,655.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr3 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 120,165.0X | 6,262.0Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr4 | 99.0% | 99.0% | 98.0% | 56.0% | 1.0% | 30X | 31.1X | 0.0X | 56,933.0X | 5,909.1Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 31.1X | 0.0X | 64,463.0X | 5,655.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr6 | 99.0% | 99.0% | 98.0% | 61.0% | 1.0% | 31X | 31.4X | 0.0X | 6,923.0X | 5,369.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr7 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 30.9X | 0.0X | 3,726.0X | 4,925.9Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 2,566.0X | 4,500.3Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 83.0% | 52.0% | 1.0% | 30X | 26.8X | 0.0X | 3,861.0X | 3,705.9Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 98.0% | 63.0% | 1.0% | 32X | 32.1X | 0.0X | 50,863.0X | 4,299.5Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.5X | 0.0X | 2,279.0X | 4,253.7Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr12 | 99.0% | 99.0% | 98.0% | 64.0% | 1.0% | 32X | 31.8X | 0.0X | 54,142.0X | 4,242.3Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr13 | 85.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 26.9X | 0.0X | 67,584.0X | 3,082.3Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr14 | 83.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.7X | 0.0X | 6,281.0X | 2,855.6Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr15 | 80.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.7X | 0.0X | 15,658.0X | 2,622.3Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr16 | 88.0% | 87.0% | 86.0% | 59.0% | 2.0% | 32X | 31.0X | 0.0X | 39,901.0X | 2,800.6Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr17 | 96.0% | 94.0% | 94.0% | 69.0% | 2.0% | 33X | 32.8X | 0.0X | 23,228.0X | 2,729.3Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr18 | 98.0% | 95.0% | 94.0% | 55.0% | 1.0% | 31X | 29.7X | 0.0X | 22,932.0X | 2,389.3Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr19 | 95.0% | 95.0% | 94.0% | 70.0% | 3.0% | 33X | 32.5X | 0.0X | 1,766.0X | 1,903.7Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr20 | 97.0% | 96.0% | 95.0% | 66.0% | 2.0% | 32X | 32.6X | 0.0X | 5,954.0X | 2,101.3Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 26.2X | 0.0X | 24,451.0X | 1,225.6Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.md.chr22 | 72.0% | 71.0% | 70.0% | 52.0% | 3.0% | 30X | 25.1X | 0.0X | 25,202.0X | 1,273.1Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.mrkdup.sort | 378bp | 414bp | 2.0M | 34.1X | 0.59% | 99.7% | 709.2M | 711.6M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.oct.snv.sort | 5,029,282 | 3,964,566 | 1,065,465 | 1.99 | 164 | 120,401 | 1,564 | 5,029,282 | 3,964,566 | 1,065,465 | 1.99 | 164 | 120,401 | 1,564 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.sentd.snv.sort | 5,969,388 | 4,909,217 | 1,066,865 | 1.66 | 0 | 89,094 | 4,274 | 5,969,388 | 4,909,217 | 1,066,865 | 1.66 | 0 | 89,094 | 4,274 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.sent.st | 0.59% | 4.6M | 709.2M | 99.7% | 97.7% | 4.7% | 711.6M | 409.7bp | 716.2M | 713.9M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.clair3.snv.sort | 5,729,054 | 4,045,557 | 939,164 | 1.94 | 0 | 90,483 | 1,654 | 5,729,054 | 4,045,557 | 939,164 | 1.94 | 0 | 90,483 | 1,654 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.deep.snv.sort | 8,138,646 | 6,832,848 | 1,310,845 | 0.78 | 0 | 88,659 | 2,288 | 8,138,646 | 6,832,848 | 1,310,845 | 0.78 | 0 | 88,659 | 2,288 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.lfq2.snv.sort | 3,828,941 | 3,828,941 | 0 | 2.02 | 0 | 0 | 0 | 3,828,941 | 3,828,941 | 0 | 2.02 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 91.0% | 60.0% | 2.0% | 31X | 31.4X | 0.0X | 71,108.0X | 7,817.2Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 282,955.0X | 7,664.8Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr3 | 100.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.6X | 0.0X | 127,747.0X | 6,261.5Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr4 | 99.0% | 99.0% | 99.0% | 55.0% | 1.0% | 30X | 31.3X | 0.0X | 53,438.0X | 5,951.7Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 31.1X | 0.0X | 38,128.0X | 5,638.7Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr6 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.4X | 0.0X | 20,653.0X | 5,371.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 97.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 17,683.0X | 4,937.9Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 98.0% | 59.0% | 1.0% | 31X | 31.0X | 0.0X | 8,058.0X | 4,503.6Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr9 | 86.0% | 84.0% | 83.0% | 52.0% | 1.0% | 30X | 26.8X | 0.0X | 13,645.0X | 3,710.4Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 98.0% | 63.0% | 1.0% | 32X | 32.3X | 0.0X | 27,174.0X | 4,320.7Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr11 | 99.0% | 99.0% | 98.0% | 63.0% | 1.0% | 32X | 31.6X | 0.0X | 2,409.0X | 4,266.2Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 99.0% | 63.0% | 1.0% | 32X | 31.9X | 0.0X | 44,621.0X | 4,255.4Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr13 | 86.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 27.1X | 0.0X | 36,274.0X | 3,096.5Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.6X | 0.0X | 2,935.0X | 2,850.4Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.7X | 0.0X | 16,330.0X | 2,625.3Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 86.0% | 59.0% | 2.0% | 32X | 31.1X | 0.0X | 38,013.0X | 2,812.1Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 95.0% | 69.0% | 3.0% | 33X | 33.3X | 0.0X | 23,899.0X | 2,772.3Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 95.0% | 55.0% | 1.0% | 30X | 29.9X | 0.0X | 18,164.0X | 2,405.8Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr19 | 95.0% | 95.0% | 94.0% | 69.0% | 2.0% | 33X | 32.4X | 0.0X | 2,436.0X | 1,899.0Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr20 | 98.0% | 96.0% | 96.0% | 65.0% | 2.0% | 32X | 33.0X | 0.0X | 30,865.0X | 2,125.0Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr21 | 78.0% | 76.0% | 75.0% | 46.0% | 3.0% | 29X | 26.2X | 0.0X | 37,224.0X | 1,223.7Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 52.0% | 3.0% | 30X | 25.0X | 0.0X | 18,140.0X | 1,269.7Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.mrkdup.sort | 33.9X | 0.61% | 99.0% | 704.4M | 711.6M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.oct.snv.sort | 4,994,975 | 3,930,824 | 1,064,907 | 1.99 | 168 | 121,430 | 1,540 | 4,994,975 | 3,930,824 | 1,064,907 | 1.99 | 168 | 121,430 | 1,540 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.sentd.snv.sort | 5,922,720 | 4,859,328 | 1,070,040 | 1.66 | 0 | 89,296 | 4,324 | 5,922,720 | 4,859,328 | 1,070,040 | 1.66 | 0 | 89,296 | 4,324 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG002-19_DBC0_0.strobe.st | 0.61% | 169.6M | 704.4M | 99.0% | 96.4% | 3.7% | 711.6M | 414.2bp | 881.2M | 872.7M | 99.0% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0 | 0.739% | RIH0_ANA0-HG003-19_DBC0_0 | EUR | 0.7 | 0.3 | True | male | 42% | 384 | 94.5% | 94.2% | 93.7% | 69.0% | 4.8% | 34X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.clair3.snv.sort | 4,973,520 | 4,042,082 | 936,500 | 1.95 | 0 | 90,336 | 1,648 | 4,973,520 | 4,042,082 | 936,500 | 1.95 | 0 | 90,336 | 1,648 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.deep.snv.sort | 8,120,004 | 6,822,215 | 1,303,186 | 0.78 | 0 | 88,377 | 2,148 | 8,120,004 | 6,822,215 | 1,303,186 | 0.78 | 0 | 88,377 | 2,148 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,921,586 | 3,921,586 | 0 | 2.00 | 0 | 0 | 0 | 3,921,586 | 3,921,586 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr1 | 92.0% | 91.0% | 90.0% | 60.0% | 1.0% | 31X | 30.6X | 0.0X | 56,907.0X | 7,624.8Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 281,977.0X | 7,664.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 99.0% | 99.0% | 62.0% | 1.0% | 32X | 31.7X | 0.0X | 114,585.0X | 6,293.5Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 99.0% | 98.0% | 58.0% | 1.0% | 31X | 31.3X | 0.0X | 74,102.0X | 5,946.5Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 31.2X | 0.0X | 68,604.0X | 5,672.8Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 3,276.0X | 5,375.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 97.0% | 61.0% | 1.0% | 31X | 31.0X | 0.0X | 4,289.0X | 4,934.7Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 31X | 31.1X | 0.0X | 2,053.0X | 4,514.8Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 84.0% | 83.0% | 53.0% | 1.0% | 30X | 26.8X | 0.0X | 3,666.0X | 3,709.3Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.1X | 0.0X | 25,998.0X | 4,290.7Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.4X | 0.0X | 2,278.0X | 4,237.6Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 31.8X | 0.0X | 57,442.0X | 4,237.8Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 85.0% | 85.0% | 49.0% | 1.0% | 29X | 27.2X | 0.0X | 68,867.0X | 3,108.1Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 82.0% | 54.0% | 1.0% | 30X | 26.6X | 0.0X | 5,156.0X | 2,846.0Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.7X | 0.0X | 8,462.0X | 2,622.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 58.0% | 2.0% | 31X | 31.4X | 0.0X | 49,133.0X | 2,833.9Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 94.0% | 68.0% | 2.0% | 33X | 32.4X | 0.0X | 23,767.0X | 2,693.3Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 95.0% | 94.0% | 57.0% | 1.0% | 31X | 29.9X | 0.0X | 27,243.0X | 2,406.7Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 95.0% | 94.0% | 68.0% | 2.0% | 33X | 32.0X | 0.0X | 1,601.0X | 1,873.2Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 66.0% | 2.0% | 32X | 32.4X | 0.0X | 7,828.0X | 2,086.6Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 75.0% | 48.0% | 3.0% | 29X | 26.3X | 0.0X | 23,332.0X | 1,229.4Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 71.0% | 70.0% | 51.0% | 2.0% | 30X | 24.6X | 0.0X | 25,178.0X | 1,250.4Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.mrkdup.sort | 384bp | 421bp | 2.0M | 34.4X | 0.60% | 99.6% | 715.5M | 718.6M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.oct.snv.sort | 4,983,520 | 3,921,919 | 1,062,380 | 2.00 | 179 | 118,969 | 1,508 | 4,983,520 | 3,921,919 | 1,062,380 | 2.00 | 179 | 118,969 | 1,508 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.sentd.snv.sort | 5,876,352 | 4,820,969 | 1,061,921 | 1.68 | 0 | 88,238 | 4,083 | 5,876,352 | 4,820,969 | 1,061,921 | 1.68 | 0 | 88,238 | 4,083 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.bwa2a.st | 0.60% | 4.3M | 715.5M | 99.6% | 97.5% | 4.9% | 718.6M | 417.6bp | 722.9M | 719.9M | 99.6% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.md | 95.0% | 95.0% | 94.0% | 67.0% | 1.0% | 32X | 30.8X | 0.0X | 366,693.0X | 95,606.1Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.clair3.snv.sort | 5,012,160 | 4,079,633 | 937,614 | 1.93 | 0 | 90,363 | 1,688 | 5,012,160 | 4,079,633 | 937,614 | 1.93 | 0 | 90,363 | 1,688 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.deep.snv.sort | 8,204,158 | 6,898,473 | 1,311,049 | 0.77 | 0 | 88,400 | 2,186 | 8,204,158 | 6,898,473 | 1,311,049 | 0.77 | 0 | 88,400 | 2,186 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.lfq2.snv.sort | 3,934,638 | 3,934,638 | 0 | 1.99 | 0 | 0 | 0 | 3,934,638 | 3,934,638 | 0 | 1.99 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 90.0% | 60.0% | 1.0% | 31X | 30.9X | 0.0X | 56,915.0X | 7,683.2Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.7X | 0.0X | 278,320.0X | 7,678.6Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr3 | 99.0% | 99.0% | 99.0% | 62.0% | 1.0% | 32X | 31.8X | 0.0X | 114,413.0X | 6,297.4Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr4 | 99.0% | 99.0% | 98.0% | 58.0% | 1.0% | 31X | 31.3X | 0.0X | 50,959.0X | 5,956.4Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 31.3X | 0.0X | 54,940.0X | 5,680.3Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr6 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 3,344.0X | 5,378.1Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr7 | 98.0% | 97.0% | 97.0% | 61.0% | 1.0% | 31X | 31.0X | 0.0X | 3,666.0X | 4,940.7Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 31X | 31.1X | 0.0X | 2,528.0X | 4,520.0Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 83.0% | 53.0% | 1.0% | 30X | 26.9X | 0.0X | 3,742.0X | 3,716.2Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.2X | 0.0X | 43,027.0X | 4,307.3Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.4X | 0.0X | 2,144.0X | 4,246.3Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr12 | 99.0% | 99.0% | 98.0% | 64.0% | 1.0% | 32X | 31.8X | 0.0X | 53,077.0X | 4,243.2Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr13 | 85.0% | 85.0% | 85.0% | 50.0% | 1.0% | 30X | 27.4X | 0.0X | 68,114.0X | 3,129.8Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr14 | 83.0% | 82.0% | 82.0% | 54.0% | 1.0% | 30X | 26.6X | 0.0X | 8,043.0X | 2,846.7Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr15 | 81.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.7X | 0.0X | 17,439.0X | 2,624.6Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr16 | 88.0% | 87.0% | 86.0% | 58.0% | 2.0% | 31X | 31.4X | 0.0X | 49,257.0X | 2,837.1Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr17 | 96.0% | 95.0% | 94.0% | 68.0% | 2.0% | 33X | 32.4X | 0.0X | 24,315.0X | 2,699.8Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr18 | 98.0% | 96.0% | 94.0% | 57.0% | 1.0% | 31X | 30.1X | 0.0X | 27,001.0X | 2,415.5Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr19 | 95.0% | 95.0% | 94.0% | 68.0% | 2.0% | 33X | 32.0X | 0.0X | 1,588.0X | 1,873.6Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr20 | 98.0% | 96.0% | 96.0% | 66.0% | 2.0% | 32X | 32.5X | 0.0X | 5,484.0X | 2,091.0Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 75.0% | 48.0% | 3.0% | 29X | 26.3X | 0.0X | 23,989.0X | 1,230.5Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.md.chr22 | 72.0% | 71.0% | 70.0% | 51.0% | 2.0% | 30X | 24.6X | 0.0X | 24,933.0X | 1,252.4Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.mrkdup.sort | 384bp | 421bp | 2.0M | 34.4X | 0.59% | 99.5% | 715.3M | 718.6M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.oct.snv.sort | 5,006,863 | 3,943,772 | 1,063,855 | 1.99 | 178 | 119,119 | 1,521 | 5,006,863 | 3,943,772 | 1,063,855 | 1.99 | 178 | 119,119 | 1,521 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.sentd.snv.sort | 5,942,122 | 4,882,416 | 1,066,299 | 1.67 | 0 | 88,355 | 4,129 | 5,942,122 | 4,882,416 | 1,066,299 | 1.67 | 0 | 88,355 | 4,129 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.sent.st | 0.59% | 4.6M | 715.3M | 99.5% | 97.5% | 4.6% | 718.6M | 417.9bp | 723.2M | 719.9M | 99.5% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.clair3.snv.sort | 5,584,154 | 4,026,773 | 937,557 | 1.94 | 0 | 89,983 | 1,564 | 5,584,154 | 4,026,773 | 937,557 | 1.94 | 0 | 89,983 | 1,564 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.deep.snv.sort | 8,138,863 | 6,831,833 | 1,311,836 | 0.78 | 0 | 88,410 | 2,214 | 8,138,863 | 6,831,833 | 1,311,836 | 0.78 | 0 | 88,410 | 2,214 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.lfq2.snv.sort | 3,809,467 | 3,809,467 | 0 | 2.02 | 0 | 0 | 0 | 3,809,467 | 3,809,467 | 0 | 2.02 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 91.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 58,960.0X | 7,815.0Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.7X | 0.0X | 362,734.0X | 7,688.3Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr3 | 100.0% | 99.0% | 99.0% | 62.0% | 1.0% | 31X | 31.7X | 0.0X | 115,908.0X | 6,294.1Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr4 | 99.0% | 99.0% | 99.0% | 57.0% | 1.0% | 31X | 31.5X | 0.0X | 55,312.0X | 5,991.5Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 31.2X | 0.0X | 33,762.0X | 5,665.1Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr6 | 99.0% | 99.0% | 99.0% | 62.0% | 1.0% | 32X | 31.4X | 0.0X | 19,296.0X | 5,372.4Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 31X | 31.1X | 0.0X | 17,379.0X | 4,950.8Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 98.0% | 61.0% | 1.0% | 31X | 31.2X | 0.0X | 6,427.0X | 4,522.4Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr9 | 86.0% | 84.0% | 83.0% | 53.0% | 1.0% | 30X | 26.9X | 0.0X | 14,120.0X | 3,722.9Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.3X | 0.0X | 22,851.0X | 4,326.0Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr11 | 99.0% | 99.0% | 98.0% | 63.0% | 1.0% | 32X | 31.5X | 0.0X | 2,872.0X | 4,258.5Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 98.0% | 64.0% | 1.0% | 32X | 31.9X | 0.0X | 43,160.0X | 4,249.1Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr13 | 86.0% | 85.0% | 85.0% | 49.0% | 1.0% | 29X | 27.5X | 0.0X | 36,717.0X | 3,146.1Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.5X | 0.0X | 3,193.0X | 2,840.7Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 25.8X | 0.0X | 15,549.0X | 2,627.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 86.0% | 58.0% | 2.0% | 31X | 31.6X | 0.0X | 46,980.0X | 2,850.7Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 95.0% | 68.0% | 2.0% | 33X | 32.9X | 0.0X | 25,461.0X | 2,742.9Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr18 | 99.0% | 97.0% | 95.0% | 57.0% | 1.0% | 31X | 30.3X | 0.0X | 21,399.0X | 2,438.5Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr19 | 95.0% | 95.0% | 94.0% | 68.0% | 2.0% | 33X | 31.9X | 0.0X | 2,752.0X | 1,868.3Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr20 | 98.0% | 97.0% | 96.0% | 65.0% | 2.0% | 32X | 32.8X | 0.0X | 26,788.0X | 2,111.1Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr21 | 78.0% | 76.0% | 75.0% | 48.0% | 3.0% | 29X | 26.2X | 0.0X | 32,442.0X | 1,225.3Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 51.0% | 2.0% | 30X | 24.6X | 0.0X | 18,293.0X | 1,248.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.mrkdup.sort | 34.2X | 0.61% | 98.8% | 710.0M | 718.6M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.oct.snv.sort | 4,970,976 | 3,908,383 | 1,063,355 | 1.99 | 183 | 120,287 | 1,505 | 4,970,976 | 3,908,383 | 1,063,355 | 1.99 | 183 | 120,287 | 1,505 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.sentd.snv.sort | 5,889,770 | 4,827,733 | 1,068,643 | 1.66 | 0 | 88,589 | 4,160 | 5,889,770 | 4,827,733 | 1,068,643 | 1.66 | 0 | 88,589 | 4,160 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_DBC0_0.strobe.st | 0.61% | 170.0M | 710.0M | 98.8% | 96.2% | 3.6% | 718.6M | 422.6bp | 888.6M | 878.5M | 98.9% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_bwa2a | 423.2 | 385.0 | 286.0 | 181.6 | 9.9 | 1.9 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_sent | 423.3 | 385.0 | 286.0 | 181.9 | 9.9 | 1.9 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG003-19_strobe | 425.4 | 386.0 | 286.0 | 181.8 | 9.9 | 2.4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0 | 0.661% | RIH0_ANA0-HG004-19_DBC0_0 | UNKNOWN | 0.5 | 2.3 | True | female | 42% | 367 | 93.9% | 93.6% | 93.2% | 70.7% | 4.7% | 34X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.clair3.snv.sort | 5,048,626 | 4,107,476 | 946,208 | 1.95 | 0 | 93,318 | 1,762 | 5,048,626 | 4,107,476 | 946,208 | 1.95 | 0 | 93,318 | 1,762 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.deep.snv.sort | 8,097,535 | 6,793,851 | 1,309,186 | 0.80 | 0 | 91,744 | 2,314 | 8,097,535 | 6,793,851 | 1,309,186 | 0.80 | 0 | 91,744 | 2,314 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,989,294 | 3,989,294 | 0 | 2.00 | 0 | 0 | 0 | 3,989,294 | 3,989,294 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr1 | 92.0% | 91.0% | 90.0% | 58.0% | 1.0% | 31X | 30.2X | 0.0X | 68,810.0X | 7,516.1Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 222,948.0X | 7,598.4Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 123,235.0X | 6,227.1Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 0.0% | 30X | 30.9X | 0.0X | 81,572.0X | 5,870.6Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 31.0X | 0.0X | 85,308.0X | 5,626.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 99.0% | 98.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 3,772.0X | 5,316.4Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 30.6X | 0.0X | 3,161.0X | 4,883.2Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 98.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 1,431.0X | 4,463.8Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 84.0% | 83.0% | 51.0% | 1.0% | 30X | 26.5X | 0.0X | 3,456.0X | 3,663.8Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr10 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.7X | 0.0X | 31,198.0X | 4,237.5Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 32X | 31.2X | 0.0X | 775.0X | 4,210.5Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 42,250.0X | 4,198.4Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 26.5X | 0.0X | 10,817.0X | 3,030.1Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 82.0% | 52.0% | 1.0% | 30X | 26.3X | 0.0X | 3,408.0X | 2,817.4Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 78.0% | 52.0% | 1.0% | 30X | 25.5X | 0.0X | 5,644.0X | 2,600.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 57.0% | 1.0% | 31X | 30.0X | 0.0X | 32,700.0X | 2,709.2Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 94.0% | 66.0% | 2.0% | 33X | 31.9X | 0.0X | 20,006.0X | 2,655.2Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 95.0% | 94.0% | 55.0% | 1.0% | 30X | 29.5X | 0.0X | 22,115.0X | 2,374.1Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.8X | 0.0X | 1,589.0X | 1,863.1Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 65.0% | 2.0% | 32X | 32.1X | 0.0X | 8,735.0X | 2,071.4Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 25.6X | 0.0X | 21,430.0X | 1,196.2Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 3.0% | 30X | 24.4X | 0.0X | 3,354.0X | 1,238.1Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.mrkdup.sort | 369bp | 404bp | 2.0M | 34.6X | 0.56% | 99.7% | 718.6M | 720.5M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.oct.snv.sort | 5,065,563 | 3,990,514 | 1,075,892 | 2.00 | 172 | 123,978 | 1,564 | 5,065,563 | 3,990,514 | 1,075,892 | 2.00 | 172 | 123,978 | 1,564 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.sentd.snv.sort | 5,957,087 | 4,889,358 | 1,074,456 | 1.69 | 0 | 92,073 | 4,338 | 5,957,087 | 4,889,358 | 1,074,456 | 1.69 | 0 | 92,073 | 4,338 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.bwa2a.st | 0.56% | 4.2M | 718.6M | 99.7% | 97.8% | 4.6% | 720.5M | 398.9bp | 724.7M | 722.8M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.md | 94.0% | 94.0% | 94.0% | 67.0% | 1.0% | 31X | 31.1X | 0.0X | 291,942.0X | 96,301.9Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.clair3.snv.sort | 5,643,243 | 4,149,438 | 946,836 | 1.93 | 0 | 92,851 | 1,815 | 5,643,243 | 4,149,438 | 946,836 | 1.93 | 0 | 92,851 | 1,815 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.deep.snv.sort | 8,187,378 | 6,875,071 | 1,317,813 | 0.80 | 0 | 91,868 | 2,411 | 8,187,378 | 6,875,071 | 1,317,813 | 0.80 | 0 | 91,868 | 2,411 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.lfq2.snv.sort | 4,001,514 | 4,001,514 | 0 | 1.99 | 0 | 0 | 0 | 4,001,514 | 4,001,514 | 0 | 1.99 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 90.0% | 58.0% | 1.0% | 31X | 30.4X | 0.0X | 68,976.0X | 7,560.0Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 218,000.0X | 7,613.0Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr3 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 123,113.0X | 6,230.6Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 0.0% | 30X | 30.9X | 0.0X | 57,789.0X | 5,881.8Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 31.0X | 0.0X | 68,065.0X | 5,634.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr6 | 99.0% | 99.0% | 98.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 3,880.0X | 5,319.5Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr7 | 99.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 30.7X | 0.0X | 2,700.0X | 4,889.3Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 98.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 1,429.0X | 4,467.5Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 83.0% | 51.0% | 1.0% | 30X | 26.5X | 0.0X | 3,497.0X | 3,670.9Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.8X | 0.0X | 52,569.0X | 4,255.6Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.3X | 0.0X | 982.0X | 4,222.7Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr12 | 100.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 38,585.0X | 4,204.8Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr13 | 85.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 26.7X | 0.0X | 10,826.0X | 3,055.0Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr14 | 82.0% | 82.0% | 82.0% | 52.0% | 1.0% | 30X | 26.3X | 0.0X | 5,452.0X | 2,818.4Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr15 | 80.0% | 79.0% | 78.0% | 52.0% | 1.0% | 30X | 25.5X | 0.0X | 11,787.0X | 2,602.0Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr16 | 88.0% | 86.0% | 86.0% | 57.0% | 1.0% | 31X | 30.0X | 0.0X | 32,776.0X | 2,711.9Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr17 | 95.0% | 94.0% | 94.0% | 66.0% | 2.0% | 33X | 31.9X | 0.0X | 23,844.0X | 2,660.5Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr18 | 98.0% | 95.0% | 94.0% | 55.0% | 1.0% | 30X | 29.6X | 0.0X | 22,099.0X | 2,380.9Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.8X | 0.0X | 1,589.0X | 1,863.6Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr20 | 97.0% | 96.0% | 95.0% | 65.0% | 2.0% | 32X | 32.2X | 0.0X | 6,247.0X | 2,076.2Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 75.0% | 46.0% | 3.0% | 29X | 25.6X | 0.0X | 25,422.0X | 1,197.7Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 3.0% | 30X | 24.4X | 0.0X | 6,047.0X | 1,239.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.mrkdup.sort | 369bp | 403bp | 2.0M | 34.6X | 0.56% | 99.7% | 718.5M | 720.5M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.oct.snv.sort | 5,089,266 | 4,012,633 | 1,077,514 | 1.99 | 172 | 124,140 | 1,583 | 5,089,266 | 4,012,633 | 1,077,514 | 1.99 | 172 | 124,140 | 1,583 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.sentd.snv.sort | 6,024,620 | 4,952,444 | 1,078,951 | 1.67 | 0 | 92,264 | 4,484 | 6,024,620 | 4,952,444 | 1,078,951 | 1.67 | 0 | 92,264 | 4,484 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.sent.st | 0.56% | 4.5M | 718.5M | 99.7% | 97.8% | 4.3% | 720.5M | 399.2bp | 725.0M | 722.9M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.clair3.snv.sort | 5,052,010 | 4,105,136 | 951,884 | 1.93 | 0 | 93,957 | 1,699 | 5,052,010 | 4,105,136 | 951,884 | 1.93 | 0 | 93,957 | 1,699 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.deep.snv.sort | 8,163,186 | 6,838,006 | 1,330,072 | 0.80 | 0 | 92,135 | 2,501 | 8,163,186 | 6,838,006 | 1,330,072 | 0.80 | 0 | 92,135 | 2,501 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.lfq2.snv.sort | 3,877,457 | 3,877,457 | 0 | 2.01 | 0 | 0 | 0 | 3,877,457 | 3,877,457 | 0 | 2.01 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 91.0% | 58.0% | 1.0% | 31X | 30.8X | 0.0X | 70,995.0X | 7,668.0Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.5X | 0.0X | 288,252.0X | 7,625.2Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr3 | 100.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.4X | 0.0X | 136,501.0X | 6,232.0Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr4 | 99.0% | 99.0% | 98.0% | 55.0% | 0.0% | 30X | 31.2X | 0.0X | 54,967.0X | 5,927.4Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 97.0% | 58.0% | 1.0% | 31X | 30.9X | 0.0X | 40,623.0X | 5,611.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr6 | 99.0% | 99.0% | 99.0% | 60.0% | 1.0% | 31X | 31.1X | 0.0X | 14,874.0X | 5,318.9Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 97.0% | 59.0% | 1.0% | 31X | 30.8X | 0.0X | 13,092.0X | 4,901.1Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 98.0% | 58.0% | 1.0% | 31X | 30.8X | 0.0X | 10,291.0X | 4,470.3Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr9 | 86.0% | 84.0% | 83.0% | 51.0% | 1.0% | 30X | 26.6X | 0.0X | 3,954.0X | 3,680.6Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 32.0X | 0.0X | 27,931.0X | 4,279.5Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr11 | 99.0% | 99.0% | 98.0% | 61.0% | 1.0% | 32X | 31.4X | 0.0X | 1,914.0X | 4,244.3Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 99.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 32,597.0X | 4,216.6Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr13 | 86.0% | 85.0% | 85.0% | 47.0% | 1.0% | 29X | 27.0X | 0.0X | 5,070.0X | 3,091.1Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 82.0% | 51.0% | 1.0% | 30X | 26.3X | 0.0X | 2,268.0X | 2,813.8Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 78.0% | 51.0% | 1.0% | 30X | 25.5X | 0.0X | 11,859.0X | 2,604.0Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 86.0% | 57.0% | 1.0% | 31X | 30.1X | 0.0X | 31,058.0X | 2,721.6Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 95.0% | 66.0% | 2.0% | 33X | 32.4X | 0.0X | 19,254.0X | 2,694.7Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 95.0% | 55.0% | 1.0% | 30X | 29.9X | 0.0X | 17,688.0X | 2,399.4Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr19 | 95.0% | 95.0% | 94.0% | 67.0% | 2.0% | 33X | 31.7X | 0.0X | 2,006.0X | 1,859.0Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr20 | 98.0% | 96.0% | 96.0% | 64.0% | 2.0% | 32X | 32.6X | 0.0X | 31,475.0X | 2,101.3Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr21 | 78.0% | 76.0% | 75.0% | 46.0% | 3.0% | 29X | 25.8X | 0.0X | 38,570.0X | 1,204.5Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 50.0% | 3.0% | 30X | 24.4X | 0.0X | 17,420.0X | 1,240.5Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.mrkdup.sort | 34.5X | 0.59% | 99.2% | 714.7M | 720.5M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.oct.snv.sort | 5,055,985 | 3,979,380 | 1,077,489 | 1.98 | 169 | 125,220 | 1,549 | 5,055,985 | 3,979,380 | 1,077,489 | 1.98 | 169 | 125,220 | 1,549 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.sentd.snv.sort | 5,987,781 | 4,912,249 | 1,082,390 | 1.66 | 0 | 92,742 | 4,727 | 5,987,781 | 4,912,249 | 1,082,390 | 1.66 | 0 | 92,742 | 4,727 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_DBC0_0.strobe.st | 0.59% | 160.7M | 714.7M | 99.2% | 96.7% | 3.4% | 720.5M | 402.9bp | 881.2M | 874.2M | 99.2% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_bwa2a | 404.4 | 368.0 | 285.0 | 170.6 | 9.9 | 1.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_sent | 404.4 | 368.0 | 285.0 | 170.8 | 9.9 | 1.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG004-19_strobe | 406.7 | 369.0 | 285.0 | 171.4 | 9.9 | 2.3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0 | 0.818% | RIH0_ANA0-HG005-19_DBC0_0 | EAS | 1.0 | 0.3 | True | male | 42% | 363 | 94.5% | 94.2% | 93.6% | 69.7% | 5.8% | 34X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.clair3.snv.sort | 4,956,349 | 4,026,871 | 934,498 | 1.95 | 0 | 88,942 | 1,638 | 4,956,349 | 4,026,871 | 934,498 | 1.95 | 0 | 88,942 | 1,638 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.deep.snv.sort | 8,048,050 | 6,753,279 | 1,300,148 | 0.78 | 0 | 86,480 | 2,130 | 8,048,050 | 6,753,279 | 1,300,148 | 0.78 | 0 | 86,480 | 2,130 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,903,695 | 3,903,695 | 0 | 2.00 | 0 | 0 | 0 | 3,903,695 | 3,903,695 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr1 | 91.0% | 91.0% | 90.0% | 60.0% | 1.0% | 32X | 30.7X | 0.0X | 96,209.0X | 7,638.7Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.6X | 0.0X | 236,643.0X | 7,660.7Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 115,513.0X | 6,271.1Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 99.0% | 98.0% | 57.0% | 1.0% | 31X | 31.2X | 0.0X | 82,343.0X | 5,930.4Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 31.3X | 0.0X | 86,290.0X | 5,676.1Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.4X | 0.0X | 4,422.0X | 5,370.2Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr7 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 31X | 31.1X | 0.0X | 3,955.0X | 4,948.0Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 1,984.0X | 4,502.2Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 84.0% | 83.0% | 53.0% | 1.0% | 30X | 26.8X | 0.0X | 3,311.0X | 3,713.5Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.1X | 0.0X | 31,975.0X | 4,292.9Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.5X | 0.0X | 2,260.0X | 4,252.9Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 99.0% | 98.0% | 64.0% | 1.0% | 32X | 32.0X | 0.0X | 53,469.0X | 4,261.8Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 85.0% | 85.0% | 49.0% | 1.0% | 29X | 27.1X | 0.0X | 60,670.0X | 3,094.7Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.6X | 0.0X | 4,184.0X | 2,843.9Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 26.0X | 0.0X | 6,990.0X | 2,654.6Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 59.0% | 2.0% | 32X | 30.2X | 0.0X | 28,635.0X | 2,728.7Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 94.0% | 69.0% | 2.0% | 33X | 32.6X | 0.0X | 24,693.0X | 2,718.1Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 95.0% | 94.0% | 57.0% | 1.0% | 31X | 29.9X | 0.0X | 20,175.0X | 2,402.9Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 95.0% | 94.0% | 70.0% | 2.0% | 34X | 32.5X | 0.0X | 1,635.0X | 1,907.2Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 66.0% | 2.0% | 33X | 32.5X | 0.0X | 8,810.0X | 2,092.2Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 75.0% | 48.0% | 3.0% | 29X | 26.2X | 0.0X | 21,319.0X | 1,221.7Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 70.0% | 70.0% | 52.0% | 3.0% | 30X | 24.9X | 0.0X | 23,123.0X | 1,264.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.mrkdup.sort | 365bp | 399bp | 2.0M | 34.8X | 0.58% | 99.7% | 723.4M | 725.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.oct.snv.sort | 4,972,020 | 3,914,256 | 1,058,530 | 2.00 | 180 | 117,599 | 1,506 | 4,972,020 | 3,914,256 | 1,058,530 | 2.00 | 180 | 117,599 | 1,506 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.sentd.snv.sort | 5,845,023 | 4,792,536 | 1,059,178 | 1.68 | 0 | 87,419 | 3,905 | 5,845,023 | 4,792,536 | 1,059,178 | 1.68 | 0 | 87,419 | 3,905 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.bwa2a.st | 0.58% | 4.3M | 723.4M | 99.7% | 97.7% | 5.1% | 725.8M | 394.0bp | 730.1M | 727.7M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.md | 95.0% | 95.0% | 94.0% | 67.0% | 1.0% | 32X | 30.9X | 0.0X | 313,434.0X | 95,827.7Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.clair3.snv.sort | 5,292,822 | 4,063,360 | 934,329 | 1.93 | 0 | 88,471 | 1,669 | 5,292,822 | 4,063,360 | 934,329 | 1.93 | 0 | 88,471 | 1,669 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.deep.snv.sort | 8,135,768 | 6,830,918 | 1,310,261 | 0.78 | 0 | 86,588 | 2,202 | 8,135,768 | 6,830,918 | 1,310,261 | 0.78 | 0 | 86,588 | 2,202 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.lfq2.snv.sort | 3,916,258 | 3,916,258 | 0 | 1.99 | 0 | 0 | 0 | 3,916,258 | 3,916,258 | 0 | 1.99 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 90.0% | 60.0% | 1.0% | 32X | 30.9X | 0.0X | 96,865.0X | 7,679.8Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.7X | 0.0X | 232,422.0X | 7,677.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr3 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 115,515.0X | 6,274.4Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr4 | 99.0% | 99.0% | 98.0% | 57.0% | 1.0% | 31X | 31.2X | 0.0X | 57,625.0X | 5,941.5Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 97.0% | 60.0% | 1.0% | 31X | 31.3X | 0.0X | 67,224.0X | 5,684.2Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr6 | 99.0% | 99.0% | 98.0% | 62.0% | 1.0% | 32X | 31.5X | 0.0X | 5,110.0X | 5,374.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr7 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 31X | 31.1X | 0.0X | 3,461.0X | 4,954.6Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 2,515.0X | 4,504.8Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 83.0% | 53.0% | 1.0% | 30X | 26.9X | 0.0X | 3,374.0X | 3,719.3Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.2X | 0.0X | 53,876.0X | 4,311.2Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 97.0% | 63.0% | 1.0% | 32X | 31.6X | 0.0X | 2,154.0X | 4,261.8Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr12 | 100.0% | 99.0% | 99.0% | 64.0% | 1.0% | 32X | 32.0X | 0.0X | 49,002.0X | 4,272.0Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr13 | 85.0% | 85.0% | 85.0% | 49.0% | 1.0% | 29X | 27.3X | 0.0X | 60,121.0X | 3,120.7Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr14 | 82.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.6X | 0.0X | 6,522.0X | 2,844.7Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr15 | 81.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 26.1X | 0.0X | 14,523.0X | 2,657.1Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr16 | 88.0% | 86.0% | 85.0% | 59.0% | 2.0% | 32X | 30.2X | 0.0X | 28,715.0X | 2,730.9Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr17 | 95.0% | 94.0% | 94.0% | 69.0% | 2.0% | 33X | 32.7X | 0.0X | 24,719.0X | 2,724.7Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr18 | 98.0% | 95.0% | 94.0% | 57.0% | 1.0% | 31X | 30.0X | 0.0X | 20,067.0X | 2,409.6Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr19 | 95.0% | 95.0% | 94.0% | 70.0% | 2.0% | 34X | 32.5X | 0.0X | 1,634.0X | 1,907.7Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr20 | 98.0% | 96.0% | 96.0% | 66.0% | 2.0% | 33X | 32.5X | 0.0X | 6,376.0X | 2,096.6Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 75.0% | 48.0% | 3.0% | 29X | 26.2X | 0.0X | 25,371.0X | 1,223.1Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.md.chr22 | 72.0% | 70.0% | 70.0% | 52.0% | 3.0% | 30X | 24.9X | 0.0X | 22,823.0X | 1,266.0Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.mrkdup.sort | 365bp | 399bp | 2.0M | 34.8X | 0.57% | 99.6% | 723.2M | 725.8M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.oct.snv.sort | 4,994,659 | 3,935,358 | 1,060,079 | 1.99 | 176 | 117,640 | 1,527 | 4,994,659 | 3,935,358 | 1,060,079 | 1.99 | 176 | 117,640 | 1,527 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.sentd.snv.sort | 5,908,874 | 4,852,636 | 1,062,962 | 1.67 | 0 | 87,675 | 4,083 | 5,908,874 | 4,852,636 | 1,062,962 | 1.67 | 0 | 87,675 | 4,083 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.sent.st | 0.57% | 4.5M | 723.2M | 99.6% | 97.7% | 4.9% | 725.8M | 394.3bp | 730.3M | 727.8M | 99.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.clair3.snv.sort | 4,951,038 | 4,016,905 | 939,213 | 1.94 | 0 | 89,524 | 1,548 | 4,951,038 | 4,016,905 | 939,213 | 1.94 | 0 | 89,524 | 1,548 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.deep.snv.sort | 8,086,509 | 6,780,197 | 1,311,074 | 0.78 | 0 | 86,670 | 2,173 | 8,086,509 | 6,780,197 | 1,311,074 | 0.78 | 0 | 86,670 | 2,173 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.lfq2.snv.sort | 3,795,306 | 3,795,306 | 0 | 2.01 | 0 | 0 | 0 | 3,795,306 | 3,795,306 | 0 | 2.01 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 91.0% | 60.0% | 2.0% | 31X | 31.3X | 0.0X | 101,075.0X | 7,786.5Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 98.0% | 62.0% | 1.0% | 32X | 31.8X | 0.0X | 309,598.0X | 7,690.1Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr3 | 99.0% | 99.0% | 99.0% | 61.0% | 1.0% | 31X | 31.6X | 0.0X | 117,460.0X | 6,271.1Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr4 | 99.0% | 99.0% | 98.0% | 56.0% | 1.0% | 31X | 31.5X | 0.0X | 55,217.0X | 5,984.9Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 97.0% | 59.0% | 1.0% | 31X | 31.2X | 0.0X | 41,189.0X | 5,663.3Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr6 | 99.0% | 99.0% | 98.0% | 61.0% | 1.0% | 31X | 31.5X | 0.0X | 18,784.0X | 5,373.6Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 97.0% | 61.0% | 1.0% | 31X | 31.2X | 0.0X | 16,144.0X | 4,967.8Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 98.0% | 60.0% | 1.0% | 31X | 31.0X | 0.0X | 7,719.0X | 4,503.3Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr9 | 87.0% | 84.0% | 83.0% | 52.0% | 1.0% | 30X | 26.9X | 0.0X | 13,203.0X | 3,725.4Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 98.0% | 64.0% | 1.0% | 32X | 32.4X | 0.0X | 28,370.0X | 4,330.8Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr11 | 99.0% | 98.0% | 98.0% | 63.0% | 1.0% | 32X | 31.6X | 0.0X | 2,329.0X | 4,273.6Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 99.0% | 64.0% | 1.0% | 32X | 32.3X | 0.0X | 41,035.0X | 4,299.3Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr13 | 86.0% | 85.0% | 85.0% | 49.0% | 1.0% | 29X | 27.5X | 0.0X | 34,114.0X | 3,145.4Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 82.0% | 53.0% | 1.0% | 30X | 26.5X | 0.0X | 2,742.0X | 2,839.7Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 78.0% | 53.0% | 1.0% | 30X | 26.1X | 0.0X | 14,845.0X | 2,662.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 85.0% | 59.0% | 2.0% | 32X | 30.3X | 0.0X | 27,388.0X | 2,738.1Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 95.0% | 69.0% | 2.0% | 33X | 33.3X | 0.0X | 26,348.0X | 2,774.5Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 95.0% | 57.0% | 1.0% | 31X | 30.2X | 0.0X | 15,412.0X | 2,428.8Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr19 | 95.0% | 95.0% | 94.0% | 70.0% | 2.0% | 33X | 32.5X | 0.0X | 2,338.0X | 1,902.8Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr20 | 98.0% | 97.0% | 96.0% | 66.0% | 2.0% | 33X | 32.9X | 0.0X | 31,591.0X | 2,122.3Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr21 | 78.0% | 76.0% | 75.0% | 48.0% | 3.0% | 29X | 26.2X | 0.0X | 38,926.0X | 1,225.5Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 52.0% | 3.0% | 30X | 24.9X | 0.0X | 17,709.0X | 1,263.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.mrkdup.sort | 34.6X | 0.59% | 99.0% | 718.6M | 725.8M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.oct.snv.sort | 4,958,187 | 3,899,714 | 1,059,154 | 1.98 | 178 | 119,000 | 1,473 | 4,958,187 | 3,899,714 | 1,059,154 | 1.98 | 178 | 119,000 | 1,473 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.sentd.snv.sort | 5,865,559 | 4,806,244 | 1,066,030 | 1.66 | 0 | 87,972 | 4,189 | 5,865,559 | 4,806,244 | 1,066,030 | 1.66 | 0 | 87,972 | 4,189 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_DBC0_0.strobe.st | 0.59% | 178.7M | 718.6M | 99.0% | 96.4% | 3.9% | 725.8M | 398.3bp | 904.5M | 895.9M | 99.0% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_bwa2a | 399.2 | 364.0 | 282.0 | 167.7 | 10.8 | 1.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_sent | 399.2 | 364.0 | 282.0 | 167.9 | 10.8 | 1.9 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG005-19_strobe | 401.7 | 365.0 | 286.0 | 168.5 | 10.8 | 2.4 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0 | 0.345% | RIH0_ANA0-HG006-19_DBC0_0 | EAS | 1.0 | 0.3 | True | male | 44% | 391 | 94.4% | 93.4% | 90.0% | 56.3% | 13.5% | 32X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.clair3.snv.sort | 4,989,253 | 4,081,054 | 912,838 | 1.89 | 0 | 86,397 | 1,656 | 4,989,253 | 4,081,054 | 912,838 | 1.89 | 0 | 86,397 | 1,656 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.deep.snv.sort | 7,925,380 | 6,727,433 | 1,202,822 | 0.77 | 0 | 81,202 | 2,089 | 7,925,380 | 6,727,433 | 1,202,822 | 0.77 | 0 | 81,202 | 2,089 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,706,003 | 3,706,003 | 0 | 2.01 | 0 | 0 | 0 | 3,706,003 | 3,706,003 | 0 | 2.01 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr1 | 92.0% | 90.0% | 88.0% | 55.0% | 8.0% | 32X | 30.8X | 0.0X | 91,587.0X | 7,668.1Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 97.0% | 94.0% | 52.0% | 6.0% | 30X | 30.4X | 0.0X | 327,784.0X | 7,352.2Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 98.0% | 94.0% | 51.0% | 5.0% | 30X | 29.7X | 0.0X | 79,265.0X | 5,888.4Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 97.0% | 91.0% | 40.0% | 3.0% | 26X | 27.1X | 0.0X | 96,898.0X | 5,152.6Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 96.0% | 92.0% | 48.0% | 5.0% | 29X | 29.2X | 0.0X | 104,771.0X | 5,298.5Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 98.0% | 94.0% | 50.0% | 5.0% | 30X | 29.3X | 0.0X | 5,012.0X | 5,007.2Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 93.0% | 52.0% | 6.0% | 30X | 29.9X | 0.0X | 3,649.0X | 4,764.2Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 97.0% | 94.0% | 51.0% | 5.0% | 30X | 29.6X | 0.0X | 1,520.0X | 4,293.3Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 83.0% | 80.0% | 48.0% | 7.0% | 29X | 26.7X | 0.0X | 4,194.0X | 3,691.0Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 97.0% | 95.0% | 60.0% | 7.0% | 33X | 32.5X | 0.0X | 40,386.0X | 4,346.1Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 97.0% | 94.0% | 57.0% | 8.0% | 32X | 31.5X | 0.0X | 782.0X | 4,249.3Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 98.0% | 95.0% | 56.0% | 7.0% | 32X | 31.2X | 0.0X | 31,803.0X | 4,159.3Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 84.0% | 79.0% | 37.0% | 3.0% | 24X | 23.9X | 0.0X | 34,433.0X | 2,736.7Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 79.0% | 46.0% | 6.0% | 28X | 26.0X | 0.0X | 4,438.0X | 2,786.8Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 77.0% | 51.0% | 7.0% | 30X | 26.7X | 0.0X | 4,715.0X | 2,725.5Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 84.0% | 63.0% | 12.0% | 35X | 33.3X | 0.0X | 29,027.0X | 3,008.1Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 93.0% | 72.0% | 15.0% | 38X | 36.7X | 0.0X | 33,836.0X | 3,059.0Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 94.0% | 90.0% | 47.0% | 4.0% | 29X | 28.2X | 0.0X | 26,201.0X | 2,264.2Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 94.0% | 94.0% | 80.0% | 19.0% | 40X | 38.4X | 0.0X | 2,109.0X | 2,247.8Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 94.0% | 70.0% | 11.0% | 36X | 35.5X | 0.0X | 10,685.0X | 2,290.7Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 74.0% | 71.0% | 40.0% | 7.0% | 24X | 25.1X | 0.0X | 25,462.0X | 1,172.5Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 70.0% | 69.0% | 58.0% | 14.0% | 35X | 28.7X | 0.0X | 11,722.0X | 1,459.4Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.mrkdup.sort | 386bp | 409bp | 2.0M | 33.7X | 0.69% | 98.2% | 706.9M | 720.0M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.oct.snv.sort | 4,897,884 | 3,872,068 | 1,026,218 | 2.00 | 176 | 110,096 | 1,460 | 4,897,884 | 3,872,068 | 1,026,218 | 2.00 | 176 | 110,096 | 1,460 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.sentd.snv.sort | 5,828,198 | 4,811,274 | 1,023,035 | 1.65 | 0 | 82,906 | 3,938 | 5,828,198 | 4,811,274 | 1,023,035 | 1.65 | 0 | 82,906 | 3,938 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.bwa2a.st | 0.69% | 6.6M | 706.9M | 98.2% | 94.8% | 5.8% | 720.0M | 410.6bp | 726.6M | 713.4M | 98.2% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.md | 95.0% | 94.0% | 92.0% | 52.0% | 4.0% | 30X | 30.3X | 0.0X | 327,262.0X | 93,884.7Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.clair3.snv.sort | 5,030,886 | 4,121,168 | 914,358 | 1.87 | 0 | 86,500 | 1,689 | 5,030,886 | 4,121,168 | 914,358 | 1.87 | 0 | 86,500 | 1,689 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.deep.snv.sort | 8,017,022 | 6,812,060 | 1,209,854 | 0.77 | 0 | 81,216 | 2,148 | 8,017,022 | 6,812,060 | 1,209,854 | 0.77 | 0 | 81,216 | 2,148 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.lfq2.snv.sort | 3,719,404 | 3,719,404 | 0 | 2.01 | 0 | 0 | 0 | 3,719,404 | 3,719,404 | 0 | 2.01 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr1 | 92.0% | 90.0% | 88.0% | 55.0% | 8.0% | 32X | 31.0X | 0.0X | 91,968.0X | 7,711.8Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 94.0% | 52.0% | 6.0% | 30X | 30.4X | 0.0X | 317,298.0X | 7,372.0Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr3 | 99.0% | 98.0% | 94.0% | 51.0% | 5.0% | 30X | 29.7X | 0.0X | 79,440.0X | 5,892.5Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr4 | 99.0% | 97.0% | 91.0% | 40.0% | 3.0% | 26X | 27.1X | 0.0X | 68,355.0X | 5,165.1Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr5 | 98.0% | 96.0% | 92.0% | 48.0% | 5.0% | 29X | 29.2X | 0.0X | 83,025.0X | 5,308.2Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr6 | 99.0% | 98.0% | 94.0% | 50.0% | 5.0% | 30X | 29.3X | 0.0X | 5,122.0X | 5,010.9Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr7 | 99.0% | 97.0% | 93.0% | 52.0% | 6.0% | 30X | 29.9X | 0.0X | 3,656.0X | 4,772.2Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr8 | 99.0% | 97.0% | 94.0% | 51.0% | 5.0% | 30X | 29.6X | 0.0X | 1,522.0X | 4,296.8Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 80.0% | 48.0% | 7.0% | 29X | 26.7X | 0.0X | 4,318.0X | 3,698.8Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 95.0% | 60.0% | 7.0% | 33X | 32.7X | 0.0X | 66,552.0X | 4,369.4Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr11 | 99.0% | 97.0% | 94.0% | 57.0% | 8.0% | 32X | 31.5X | 0.0X | 2,225.0X | 4,259.2Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr12 | 100.0% | 98.0% | 95.0% | 56.0% | 7.0% | 32X | 31.3X | 0.0X | 28,124.0X | 4,167.5Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr13 | 85.0% | 84.0% | 79.0% | 37.0% | 4.0% | 24X | 24.2X | 0.0X | 34,204.0X | 2,770.0Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr14 | 82.0% | 82.0% | 79.0% | 47.0% | 6.0% | 28X | 26.0X | 0.0X | 8,220.0X | 2,787.9Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr15 | 81.0% | 79.0% | 77.0% | 51.0% | 7.0% | 30X | 26.8X | 0.0X | 9,520.0X | 2,728.2Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr16 | 88.0% | 86.0% | 84.0% | 63.0% | 12.0% | 35X | 33.3X | 0.0X | 29,061.0X | 3,011.0Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr17 | 96.0% | 94.0% | 93.0% | 72.0% | 15.0% | 38X | 36.8X | 0.0X | 34,195.0X | 3,067.5Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr18 | 98.0% | 95.0% | 90.0% | 47.0% | 4.0% | 29X | 28.3X | 0.0X | 25,595.0X | 2,272.6Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr19 | 95.0% | 94.0% | 94.0% | 80.0% | 19.0% | 40X | 38.4X | 0.0X | 2,171.0X | 2,248.3Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr20 | 98.0% | 96.0% | 94.0% | 70.0% | 12.0% | 36X | 35.6X | 0.0X | 7,644.0X | 2,296.6Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr21 | 76.0% | 74.0% | 71.0% | 40.0% | 7.0% | 25X | 25.1X | 0.0X | 30,197.0X | 1,174.6Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.md.chr22 | 72.0% | 70.0% | 69.0% | 58.0% | 14.0% | 35X | 28.8X | 0.0X | 12,154.0X | 1,461.1Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.mrkdup.sort | 386bp | 409bp | 2.0M | 33.7X | 0.69% | 98.1% | 706.6M | 720.0M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.oct.snv.sort | 4,922,231 | 3,894,749 | 1,027,861 | 1.99 | 182 | 110,011 | 1,466 | 4,922,231 | 3,894,749 | 1,027,861 | 1.99 | 182 | 110,011 | 1,466 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.sentd.snv.sort | 5,899,057 | 4,878,072 | 1,027,155 | 1.63 | 0 | 83,090 | 4,068 | 5,899,057 | 4,878,072 | 1,027,155 | 1.63 | 0 | 83,090 | 4,068 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.sent.st | 0.69% | 6.9M | 706.6M | 98.1% | 94.7% | 5.4% | 720.0M | 410.9bp | 726.9M | 713.5M | 98.2% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.clair3.snv.sort | 6,742,340 | 4,043,655 | 914,041 | 1.90 | 0 | 86,090 | 1,552 | 6,742,340 | 4,043,655 | 914,041 | 1.90 | 0 | 86,090 | 1,552 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.deep.snv.sort | 7,967,224 | 6,732,992 | 1,238,431 | 0.78 | 0 | 81,679 | 2,204 | 7,967,224 | 6,732,992 | 1,238,431 | 0.78 | 0 | 81,679 | 2,204 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.lfq2.snv.sort | 3,603,997 | 3,603,997 | 0 | 2.03 | 0 | 0 | 0 | 3,603,997 | 3,603,997 | 0 | 2.03 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 88.0% | 55.0% | 8.0% | 32X | 31.3X | 0.0X | 93,628.0X | 7,794.3Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 94.0% | 52.0% | 5.0% | 30X | 30.3X | 0.0X | 321,562.0X | 7,337.9Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr3 | 99.0% | 98.0% | 94.0% | 50.0% | 5.0% | 30X | 29.6X | 0.0X | 59,428.0X | 5,862.7Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr4 | 99.0% | 97.0% | 91.0% | 40.0% | 3.0% | 26X | 27.4X | 0.0X | 66,239.0X | 5,204.9Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr5 | 98.0% | 96.0% | 92.0% | 48.0% | 4.0% | 29X | 29.0X | 0.0X | 49,248.0X | 5,261.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr6 | 99.0% | 98.0% | 94.0% | 50.0% | 5.0% | 30X | 29.2X | 0.0X | 11,522.0X | 4,990.0Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr7 | 99.0% | 97.0% | 93.0% | 52.0% | 6.0% | 30X | 29.9X | 0.0X | 10,144.0X | 4,767.3Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr8 | 99.0% | 97.0% | 94.0% | 51.0% | 5.0% | 30X | 29.5X | 0.0X | 2,974.0X | 4,278.8Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr9 | 87.0% | 84.0% | 80.0% | 47.0% | 6.0% | 29X | 26.7X | 0.0X | 4,962.0X | 3,690.5Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 95.0% | 59.0% | 7.0% | 33X | 32.7X | 0.0X | 36,302.0X | 4,379.9Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr11 | 99.0% | 98.0% | 95.0% | 57.0% | 8.0% | 32X | 31.5X | 0.0X | 1,527.0X | 4,255.9Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 95.0% | 56.0% | 7.0% | 32X | 31.3X | 0.0X | 27,144.0X | 4,166.3Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr13 | 85.0% | 84.0% | 79.0% | 37.0% | 4.0% | 24X | 24.5X | 0.0X | 17,137.0X | 2,806.7Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr14 | 83.0% | 82.0% | 79.0% | 46.0% | 6.0% | 28X | 25.9X | 0.0X | 2,542.0X | 2,771.5Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 77.0% | 50.0% | 7.0% | 30X | 26.7X | 0.0X | 9,177.0X | 2,724.0Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 85.0% | 63.0% | 12.0% | 35X | 33.3X | 0.0X | 27,413.0X | 3,010.5Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 94.0% | 73.0% | 15.0% | 38X | 37.6X | 0.0X | 37,075.0X | 3,127.5Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 91.0% | 47.0% | 4.0% | 29X | 28.4X | 0.0X | 20,587.0X | 2,285.7Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr19 | 95.0% | 94.0% | 94.0% | 79.0% | 18.0% | 40X | 38.1X | 0.0X | 1,612.0X | 2,234.0Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr20 | 98.0% | 97.0% | 95.0% | 70.0% | 11.0% | 36X | 36.0X | 0.0X | 37,683.0X | 2,317.9Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr21 | 78.0% | 75.0% | 71.0% | 40.0% | 7.0% | 24X | 25.3X | 0.0X | 45,729.0X | 1,181.6Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 69.0% | 58.0% | 14.0% | 35X | 28.7X | 0.0X | 21,941.0X | 1,457.2Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.mrkdup.sort | 33.4X | 0.69% | 96.9% | 697.3M | 719.3M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.oct.snv.sort | 4,898,757 | 3,871,270 | 1,027,881 | 1.98 | 171 | 110,985 | 1,499 | 4,898,757 | 3,871,270 | 1,027,881 | 1.98 | 171 | 110,985 | 1,499 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.sentd.snv.sort | 5,837,381 | 4,814,018 | 1,029,543 | 1.63 | 0 | 83,390 | 4,160 | 5,837,381 | 4,814,018 | 1,029,543 | 1.63 | 0 | 83,390 | 4,160 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_DBC0_0.strobe.st | 0.69% | 193.4M | 697.3M | 96.9% | 93.3% | 4.1% | 719.3M | 415.6bp | 912.7M | 887.7M | 97.3% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_bwa2a | 414.3 | 390.0 | 301.0 | 164.2 | 9.3 | 3.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_sent | 414.3 | 390.0 | 301.0 | 164.5 | 9.3 | 3.0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG006-19_strobe | 416.8 | 392.0 | 306.0 | 163.6 | 9.3 | 3.3 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0 | 0.414% | RIH0_ANA0-HG007-19_DBC0_0 | EAS | 1.0 | 1.7 | True | female | 44% | 400 | 93.8% | 93.2% | 91.4% | 61.5% | 9.3% | 33X | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.clair3.snv.sort | 5,000,078 | 4,082,422 | 922,327 | 1.92 | 0 | 89,107 | 1,675 | 5,000,078 | 4,082,422 | 922,327 | 1.92 | 0 | 89,107 | 1,675 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.deep.snv.sort | 7,993,827 | 6,760,402 | 1,238,427 | 0.78 | 0 | 84,910 | 2,231 | 7,993,827 | 6,760,402 | 1,238,427 | 0.78 | 0 | 84,910 | 2,231 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.lfq2.snv.sort | 3,819,535 | 3,819,535 | 0 | 2.01 | 0 | 0 | 0 | 3,819,535 | 3,819,535 | 0 | 2.01 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr1 | 91.0% | 91.0% | 89.0% | 56.0% | 4.0% | 31X | 30.4X | 0.0X | 101,571.0X | 7,557.2Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr2 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 30.3X | 0.0X | 346,901.0X | 7,341.6Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr3 | 99.0% | 98.0% | 96.0% | 53.0% | 2.0% | 30X | 29.9X | 0.0X | 83,012.0X | 5,919.2Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr4 | 99.0% | 98.0% | 94.0% | 44.0% | 2.0% | 28X | 28.0X | 0.0X | 82,957.0X | 5,330.9Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr5 | 98.0% | 97.0% | 94.0% | 51.0% | 2.0% | 30X | 29.5X | 0.0X | 81,278.0X | 5,347.7Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr6 | 99.0% | 98.0% | 96.0% | 52.0% | 2.0% | 30X | 29.5X | 0.0X | 4,656.0X | 5,038.5Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr7 | 98.0% | 97.0% | 95.0% | 54.0% | 3.0% | 31X | 29.9X | 0.0X | 3,633.0X | 4,767.5Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr8 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 29.9X | 0.0X | 1,864.0X | 4,334.3Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr9 | 86.0% | 84.0% | 81.0% | 49.0% | 3.0% | 29X | 26.5X | 0.0X | 3,607.0X | 3,667.3Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr10 | 98.0% | 98.0% | 96.0% | 61.0% | 4.0% | 33X | 31.9X | 0.0X | 30,977.0X | 4,274.2Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr11 | 99.0% | 98.0% | 95.0% | 58.0% | 4.0% | 32X | 30.9X | 0.0X | 873.0X | 4,178.5Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr12 | 99.0% | 98.0% | 96.0% | 58.0% | 3.0% | 32X | 30.9X | 0.0X | 43,101.0X | 4,118.5Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr13 | 85.0% | 84.0% | 81.0% | 39.0% | 2.0% | 26X | 24.5X | 0.0X | 7,534.0X | 2,806.6Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr14 | 82.0% | 82.0% | 80.0% | 47.0% | 3.0% | 29X | 25.6X | 0.0X | 4,879.0X | 2,737.5Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr15 | 80.0% | 79.0% | 77.0% | 51.0% | 3.0% | 30X | 25.9X | 0.0X | 6,955.0X | 2,642.4Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr16 | 88.0% | 86.0% | 85.0% | 63.0% | 5.0% | 34X | 33.4X | 0.0X | 58,368.0X | 3,018.5Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr17 | 95.0% | 94.0% | 93.0% | 71.0% | 7.0% | 36X | 34.3X | 0.0X | 27,390.0X | 2,858.4Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr18 | 97.0% | 95.0% | 92.0% | 50.0% | 2.0% | 30X | 28.6X | 0.0X | 27,848.0X | 2,303.0Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr19 | 95.0% | 94.0% | 94.0% | 78.0% | 8.0% | 37X | 35.6X | 0.0X | 2,155.0X | 2,088.2Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr20 | 97.0% | 96.0% | 95.0% | 70.0% | 6.0% | 35X | 34.3X | 0.0X | 8,846.0X | 2,209.1Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr21 | 76.0% | 75.0% | 72.0% | 42.0% | 5.0% | 26X | 24.7X | 0.0X | 20,792.0X | 1,152.1Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.md.chr22 | 72.0% | 71.0% | 70.0% | 57.0% | 7.0% | 33X | 26.8X | 0.0X | 2,325.0X | 1,362.4Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.mrkdup.sort | 395bp | 418bp | 2.0M | 34.3X | 0.66% | 98.7% | 718.0M | 727.5M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.oct.snv.sort | 4,966,892 | 3,925,678 | 1,041,641 | 2.00 | 169 | 114,456 | 1,477 | 4,966,892 | 3,925,678 | 1,041,641 | 2.00 | 169 | 114,456 | 1,477 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.sentd.snv.sort | 5,863,305 | 4,835,943 | 1,033,579 | 1.67 | 0 | 86,950 | 4,377 | 5,863,305 | 4,835,943 | 1,033,579 | 1.67 | 0 | 86,950 | 4,377 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.bwa2a.st | 0.66% | 6.1M | 718.0M | 98.7% | 95.5% | 5.5% | 727.5M | 419.9bp | 733.6M | 724.0M | 98.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.md | 94.0% | 94.0% | 93.0% | 58.0% | 2.0% | 32X | 30.9X | 0.0X | 408,088.0X | 95,899.2Mb | 3,099,922,541 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.clair3.snv.sort | 5,612,435 | 4,119,882 | 922,685 | 1.91 | 0 | 88,697 | 1,729 | 5,612,435 | 4,119,882 | 922,685 | 1.91 | 0 | 88,697 | 1,729 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.deep.snv.sort | 8,091,734 | 6,850,916 | 1,245,802 | 0.78 | 0 | 85,014 | 2,288 | 8,091,734 | 6,850,916 | 1,245,802 | 0.78 | 0 | 85,014 | 2,288 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.lfq2.snv.sort | 3,831,819 | 3,831,819 | 0 | 2.00 | 0 | 0 | 0 | 3,831,819 | 3,831,819 | 0 | 2.00 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr1 | 92.0% | 91.0% | 89.0% | 56.0% | 4.0% | 31X | 30.6X | 0.0X | 101,988.0X | 7,610.0Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr2 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 30.4X | 0.0X | 340,751.0X | 7,361.5Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr3 | 99.0% | 98.0% | 96.0% | 53.0% | 2.0% | 30X | 29.9X | 0.0X | 83,212.0X | 5,923.2Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr4 | 99.0% | 98.0% | 94.0% | 44.0% | 2.0% | 28X | 28.1X | 0.0X | 57,010.0X | 5,342.5Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr5 | 98.0% | 97.0% | 94.0% | 51.0% | 2.0% | 30X | 29.5X | 0.0X | 66,011.0X | 5,356.6Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr6 | 99.0% | 98.0% | 96.0% | 52.0% | 2.0% | 30X | 29.5X | 0.0X | 5,518.0X | 5,043.1Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr7 | 99.0% | 97.0% | 95.0% | 54.0% | 3.0% | 31X | 30.0X | 0.0X | 3,209.0X | 4,778.5Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr8 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 29.9X | 0.0X | 1,858.0X | 4,337.6Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr9 | 86.0% | 84.0% | 81.0% | 49.0% | 3.0% | 29X | 26.6X | 0.0X | 3,676.0X | 3,674.6Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr10 | 99.0% | 98.0% | 96.0% | 61.0% | 4.0% | 33X | 32.1X | 0.0X | 50,803.0X | 4,291.9Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr11 | 99.0% | 98.0% | 96.0% | 58.0% | 4.0% | 32X | 31.0X | 0.0X | 2,012.0X | 4,192.3Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr12 | 100.0% | 99.0% | 97.0% | 58.0% | 3.0% | 32X | 31.0X | 0.0X | 38,751.0X | 4,130.7Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr13 | 85.0% | 84.0% | 81.0% | 40.0% | 2.0% | 26X | 24.8X | 0.0X | 7,519.0X | 2,840.5Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr14 | 82.0% | 82.0% | 80.0% | 47.0% | 3.0% | 29X | 25.6X | 0.0X | 8,842.0X | 2,738.6Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr15 | 80.0% | 79.0% | 77.0% | 51.0% | 3.0% | 30X | 25.9X | 0.0X | 13,966.0X | 2,645.0Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr16 | 88.0% | 86.0% | 85.0% | 63.0% | 5.0% | 34X | 33.5X | 0.0X | 58,488.0X | 3,021.9Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr17 | 96.0% | 94.0% | 93.0% | 71.0% | 7.0% | 36X | 34.4X | 0.0X | 27,740.0X | 2,865.7Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr18 | 98.0% | 95.0% | 92.0% | 50.0% | 2.0% | 30X | 28.8X | 0.0X | 27,122.0X | 2,312.1Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr19 | 95.0% | 94.0% | 94.0% | 78.0% | 8.0% | 37X | 35.6X | 0.0X | 2,152.0X | 2,088.7Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr20 | 98.0% | 96.0% | 95.0% | 70.0% | 6.0% | 35X | 34.4X | 0.0X | 6,154.0X | 2,216.0Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr21 | 76.0% | 75.0% | 72.0% | 42.0% | 5.0% | 26X | 24.7X | 0.0X | 24,402.0X | 1,153.7Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.md.chr22 | 72.0% | 71.0% | 70.0% | 57.0% | 7.0% | 33X | 26.8X | 0.0X | 6,064.0X | 1,363.5Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.mrkdup.sort | 395bp | 418bp | 2.0M | 34.3X | 0.66% | 98.7% | 717.7M | 727.5M | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.oct.snv.sort | 4,990,626 | 3,948,156 | 1,042,908 | 1.99 | 169 | 114,423 | 1,510 | 4,990,626 | 3,948,156 | 1,042,908 | 1.99 | 169 | 114,423 | 1,510 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.sentd.snv.sort | 5,933,092 | 4,901,458 | 1,037,875 | 1.65 | 0 | 87,212 | 4,592 | 5,933,092 | 4,901,458 | 1,037,875 | 1.65 | 0 | 87,212 | 4,592 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.sent.st | 0.66% | 6.4M | 717.7M | 98.7% | 95.5% | 5.2% | 727.5M | 420.2bp | 733.9M | 724.1M | 98.7% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.clair3.snv.sort | 5,409,898 | 4,076,814 | 927,687 | 1.91 | 0 | 89,536 | 1,629 | 5,409,898 | 4,076,814 | 927,687 | 1.91 | 0 | 89,536 | 1,629 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.deep.snv.sort | 8,057,618 | 6,793,758 | 1,268,212 | 0.78 | 0 | 85,413 | 2,421 | 8,057,618 | 6,793,758 | 1,268,212 | 0.78 | 0 | 85,413 | 2,421 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.lfq2.snv.sort | 3,715,460 | 3,715,460 | 0 | 2.02 | 0 | 0 | 0 | 3,715,460 | 3,715,460 | 0 | 2.02 | 0 | 0 | 0 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr1 | 92.0% | 91.0% | 89.0% | 55.0% | 4.0% | 31X | 31.1X | 0.0X | 104,755.0X | 7,730.6Mb | 248,956,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr2 | 99.0% | 98.0% | 96.0% | 54.0% | 3.0% | 31X | 30.3X | 0.0X | 401,913.0X | 7,347.4Mb | 242,193,529 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr3 | 100.0% | 99.0% | 96.0% | 52.0% | 2.0% | 30X | 29.8X | 0.0X | 64,923.0X | 5,899.3Mb | 198,295,559 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr4 | 99.0% | 98.0% | 94.0% | 43.0% | 2.0% | 28X | 28.3X | 0.0X | 51,869.0X | 5,378.0Mb | 190,214,555 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr5 | 98.0% | 97.0% | 94.0% | 50.0% | 2.0% | 30X | 29.3X | 0.0X | 40,833.0X | 5,322.4Mb | 181,538,259 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr6 | 99.0% | 98.0% | 96.0% | 52.0% | 2.0% | 30X | 29.4X | 0.0X | 15,258.0X | 5,029.9Mb | 170,805,979 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr7 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 30.1X | 0.0X | 13,408.0X | 4,795.5Mb | 159,345,973 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr8 | 99.0% | 98.0% | 95.0% | 54.0% | 3.0% | 31X | 29.8X | 0.0X | 4,368.0X | 4,324.5Mb | 145,138,636 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr9 | 87.0% | 84.0% | 82.0% | 49.0% | 3.0% | 29X | 26.6X | 0.0X | 3,954.0X | 3,674.3Mb | 138,394,717 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr10 | 99.0% | 98.0% | 96.0% | 60.0% | 3.0% | 32X | 32.1X | 0.0X | 26,827.0X | 4,301.9Mb | 133,797,422 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr11 | 99.0% | 98.0% | 96.0% | 58.0% | 4.0% | 32X | 31.1X | 0.0X | 2,265.0X | 4,204.2Mb | 135,086,622 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr12 | 100.0% | 99.0% | 97.0% | 57.0% | 3.0% | 32X | 31.1X | 0.0X | 33,977.0X | 4,151.7Mb | 133,275,309 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr13 | 85.0% | 85.0% | 81.0% | 39.0% | 2.0% | 26X | 25.2X | 0.0X | 9,804.0X | 2,882.0Mb | 114,364,328 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr14 | 82.0% | 82.0% | 80.0% | 47.0% | 3.0% | 29X | 25.5X | 0.0X | 2,479.0X | 2,725.8Mb | 107,043,718 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr15 | 81.0% | 79.0% | 77.0% | 50.0% | 3.0% | 30X | 25.9X | 0.0X | 11,749.0X | 2,643.1Mb | 101,991,189 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr16 | 89.0% | 87.0% | 85.0% | 62.0% | 5.0% | 34X | 33.6X | 0.0X | 54,979.0X | 3,034.8Mb | 90,338,345 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr17 | 98.0% | 96.0% | 95.0% | 71.0% | 7.0% | 35X | 35.0X | 0.0X | 29,578.0X | 2,913.8Mb | 83,257,441 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr18 | 99.0% | 96.0% | 93.0% | 50.0% | 2.0% | 30X | 29.0X | 0.0X | 22,139.0X | 2,331.2Mb | 80,373,285 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr19 | 95.0% | 94.0% | 94.0% | 77.0% | 8.0% | 37X | 35.5X | 0.0X | 2,353.0X | 2,077.7Mb | 58,617,616 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr20 | 99.0% | 97.0% | 95.0% | 70.0% | 6.0% | 35X | 34.8X | 0.0X | 31,011.0X | 2,243.1Mb | 64,444,167 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr21 | 78.0% | 75.0% | 73.0% | 41.0% | 5.0% | 26X | 24.8X | 0.0X | 37,209.0X | 1,159.8Mb | 46,709,983 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.md.chr22 | 72.0% | 71.0% | 70.0% | 56.0% | 7.0% | 33X | 26.8X | 0.0X | 16,414.0X | 1,361.4Mb | 50,818,468 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.mrkdup.sort | 34.0X | 0.67% | 97.6% | 710.1M | 727.3M | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.oct.snv.sort | 4,969,126 | 3,925,925 | 1,043,632 | 1.97 | 167 | 115,667 | 1,513 | 4,969,126 | 3,925,925 | 1,043,632 | 1.97 | 167 | 115,667 | 1,513 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.sentd.snv.sort | 5,880,577 | 4,846,800 | 1,040,016 | 1.64 | 0 | 87,615 | 4,795 | 5,880,577 | 4,846,800 | 1,040,016 | 1.64 | 0 | 87,615 | 4,795 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_DBC0_0.strobe.st | 0.67% | 190.3M | 710.1M | 97.6% | 94.1% | 3.9% | 727.3M | 425.3bp | 917.5M | 897.7M | 97.8% | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_bwa2a | 423.6 | 400.0 | 320.0 | 166.3 | 9.2 | 2.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_sent | 423.6 | 400.0 | 320.0 | 166.6 | 9.1 | 2.8 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| RIH0_ANA0-HG007-19_strobe | 426.0 | 401.0 | 320.0 | 165.9 | 9.1 | 3.2 |
VerifyBAMID
Detects sample contamination and/or sample swaps.URL: https://genome.sph.umich.edu/wiki/VerifyBamIDDOI: 10.1016/j.ajhg.2012.09.004
VerifyBamID checks whether reads match known genotypes or are contaminated as a mixture of two samples. A key step in any genetic analysis is to verify whether data being generated matches expectations. verifyBamID checks whether reads in a BAM file match previous genotypes for a specific sample. In addition, it detects possible sample mixture from population allele frequency only, which can be particularly useful when the genotype data is not available. Using a mathematical model that relates observed sequence reads to an hypothetical true genotype, verifyBamID tries to decide whether sequence reads match a particular individual or are more likely to be contaminated (including a small proportion of foreign DNA), derived from a closely related individual, or derived from a completely different individual.The following values provide estimates of sample contamination. Click help for more information.
Please note that FREEMIX is named Contamination (Seq) and CHIPMIX
is named Contamination (S+A) in this MultiQC report.
VerifyBamID provides a series of information that is informative to determine
whether the sample is possibly contaminated or swapped, but there is no single
criteria that works for every circumstances. There are a few unmodeled factor
in the estimation of [SELF-IBD]/[BEST-IBD] and [%MIX], so please note that the
MLE estimation may not always exactly match to the true amount of contamination.
Here we provide a guideline to flag potentially contaminated/swapped samples:
- Each sample or lane can be checked in this way.
When
[CHIPMIX] >> 0.02and/or[FREEMIX] >> 0.02, meaning 2% or more of non-reference bases are observed in reference sites, we recommend to examine the data more carefully for the possibility of contamination. - We recommend to check each lane for the possibility of sample swaps.
When
[CHIPMIX] ~ 1AND[FREEMIX] ~ 0, then it is possible that the sample is swapped with another sample. When[CHIPMIX] ~ 0in.bestSMfile,[CHIP_ID]might be actually the swapped sample. Otherwise, the swapped sample may not exist in the genotype data you have compared. - When genotype data is not available but allele-frequency-based estimates of
[FREEMIX] >= 0.03and[FREELK1]-[FREELK0]is large, then it is possible that the sample is contaminated with other sample. We recommend to use per-sample data rather than per-lane data for checking this for low coverage data, because the inference will be more confident when there are large number of bases with depth 2 or higher.
Copied from the VerifyBAMID documentation - see the link for more details.
Showing 0/7 rows and 7/12 columns.
| Sample Name | Read Group | SNPS | M Reads | Average Depth | Contamination (Seq) | FREEELK1 | FREELK0 | FREE_RH | FREE_RA | DPREF | RDPHET | RDPALT |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| RIH0_ANA0-HG001-19_DBC0_0 | NA | 100,000 | 2.9M | 28.9X | 0.850% | -784,260 | -799,031 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG002-19_DBC0_0 | NA | 100,000 | 2.9M | 29.2X | 0.577% | -783,588 | -795,753 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG003-19_DBC0_0 | NA | 100,000 | 2.9M | 29.3X | 0.739% | -785,408 | -797,742 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG004-19_DBC0_0 | NA | 100,000 | 2.9M | 28.9X | 0.661% | -782,309 | -793,928 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG005-19_DBC0_0 | NA | 100,000 | 2.9M | 29.2X | 0.818% | -745,824 | -783,964 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG006-19_DBC0_0 | NA | 100,000 | 2.9M | 29.1X | 0.345% | -730,563 | -737,433 | NA | NA | NA | NA | NA |
| RIH0_ANA0-HG007-19_DBC0_0 | NA | 100,000 | 2.9M | 29.0X | 0.414% | -731,695 | -739,951 | NA | NA | NA | NA | NA |
Peddy
Compares familial-relationships and sexes as reported in a PED file with those inferred from a VCF.URL: https://github.com/brentp/peddyDOI: 10.1016/j.ajhg.2017.01.017
It samples the VCF at about 25000 sites (plus chrX) to accurately estimate relatedness, IBS0, heterozygosity, sex and ancestry. It uses 2504 thousand genome samples as backgrounds to calibrate the relatedness calculation and to make ancestry predictions. It does this very quickly by sampling, by using C for computationally intensive parts, and parallelization.PCA Plot
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Het Check
Proportion of sites that were heterozygous against median depth.
A high proportion of heterozygous sites suggests contamination, a low proportion suggests consanguinity.
See the main peddy documentation for more details about the het_check command.
Created with MultiQC
Sex Check
Predicted sex against heterozygosity ratio
Higher values of Sex Het Ratio suggests the sample is female, low values suggest male.
See the main peddy documentation for more details about the het_check command.
Created with MultiQC
Samtools
Version:
1.21
Toolkit for interacting with BAM/CRAM files.URL: http://www.htslib.orgDOI: 10.1093/bioinformatics/btp352
Percent mapped
Alignment metrics from samtools stats; mapped vs. unmapped reads vs. reads mapped with MQ0.
For a set of samples that have come from the same multiplexed library, similar numbers of reads for each sample are expected. Large differences in numbers might indicate issues during the library preparation process. Whilst large differences in read numbers may be controlled for in downstream processings (e.g. read count normalisation), you may wish to consider whether the read depths achieved have fallen below recommended levels depending on the applications.
Low alignment rates could indicate contamination of samples (e.g. adapter sequences), low sequencing quality or other artefacts. These can be further investigated in the sequence level QC (e.g. from FastQC).
Reads mapped with MQ0 often indicate that the reads are ambiguously mapped to multiple locations in the reference sequence. This can be due to repetitive regions in the genome, the presence of alternative contigs in the reference, or due to reads that are too short to be uniquely mapped. These reads are often filtered out in downstream analyses.
Alignment stats
This module parses the output from samtools stats. All numbers in millions.
Created with MultiQC
Flagstat
This module parses the output from samtools flagstat
Created with MultiQC
XY counts
Mapped reads per contig
The samtools idxstats tool counts the number of mapped reads per chromosome / contig. Chromosomes with < 0.1% of the total aligned reads are omitted from this plot.
Created with MultiQC
Picard
Tools for manipulating high-throughput sequencing data.URL: http://broadinstitute.github.io/picard
Alignment Summary
Please note that Picard's read counts are divided by two for paired-end data. Total bases (including unaligned) is not provided.
Mean read length
The mean read length of the set of reads examined.
Base Distribution
Plot shows the distribution of bases by cycle.
Created with MultiQC
GC Coverage Bias
This plot shows bias in coverage across regions of the genome with varying GC content. A perfect library would be a flat line at y = 1.
Created with MultiQC
Insert Size
Plot shows the number of reads at a given insert size. Reads with different orientations are summed.
Created with MultiQC
Mean Base Quality by Cycle
Plot shows the mean base quality by cycle.
This metric gives an overall snapshot of sequencing machine performance. For most types of sequencing data, the output is expected to show a slight reduction in overall base quality scores towards the end of each read.
Spikes in quality within reads are not expected and may indicate that technical problems occurred during sequencing.
Created with MultiQC
Base Quality Distribution
Plot shows the count of each base quality score.
Created with MultiQC
QualiMap
Quality control of alignment data and its derivatives like feature counts.URL: http://qualimap.bioinfo.cipf.esDOI: 10.1093/bioinformatics/btv566; 10.1093/bioinformatics/bts503
Coverage histogram
Distribution of the number of locations in the reference genome with a given depth of coverage.
For a set of DNA or RNA reads mapped to a reference sequence, such as a genome or transcriptome, the depth of coverage at a given base position is the number of high-quality reads that map to the reference at that position (Sims et al. 2014).
Bases of a reference sequence (y-axis) are groupped by their depth of coverage (0×, 1×, …, N×) (x-axis). This plot shows the frequency of coverage depths relative to the reference sequence for each read dataset, which provides an indirect measure of the level and variation of coverage depth in the corresponding sequenced sample.
If reads are randomly distributed across the reference sequence, this plot should resemble a Poisson distribution (Lander & Waterman 1988), with a peak indicating approximate depth of coverage, and more uniform coverage depth being reflected in a narrower spread. The optimal level of coverage depth depends on the aims of the experiment, though it should at minimum be sufficiently high to adequately address the biological question; greater uniformity of coverage is generally desirable, because it increases breadth of coverage for a given depth of coverage, allowing equivalent results to be achieved at a lower sequencing depth (Sampson et al. 2011; Sims et al. 2014). However, it is difficult to achieve uniform coverage depth in practice, due to biases introduced during sample preparation (van Dijk et al. 2014), sequencing (Ross et al. 2013) and read mapping (Sims et al. 2014).
This plot may include a small peak for regions of the reference sequence with zero depth of coverage. Such regions may be absent from the given sample (due to a deletion or structural rearrangement), present in the sample but not successfully sequenced (due to bias in sequencing or preparation), or sequenced but not successfully mapped to the reference (due to the choice of mapping algorithm, the presence of repeat sequences, or mismatches caused by variants or sequencing errors). Related factors cause most datasets to contain some unmapped reads (Sims et al. 2014).
Created with MultiQC
Cumulative genome coverage
Percentage of the reference genome with at least the given depth of coverage.
For a set of DNA or RNA reads mapped to a reference sequence, such as a genome or transcriptome, the depth of coverage at a given base position is the number of high-quality reads that map to the reference at that position, while the breadth of coverage is the fraction of the reference sequence to which reads have been mapped with at least a given depth of coverage (Sims et al. 2014).
Defining coverage breadth in terms of coverage depth is useful, because sequencing experiments typically require a specific minimum depth of coverage over the region of interest (Sims et al. 2014), so the extent of the reference sequence that is amenable to analysis is constrained to lie within regions that have sufficient depth. With inadequate sequencing breadth, it can be difficult to distinguish the absence of a biological feature (such as a gene) from a lack of data (Green 2007).
For increasing coverage depths (1×, 2×, …, N×), coverage breadth is calculated as the percentage of the reference sequence that is covered by at least that number of reads, then plots coverage breadth (y-axis) against coverage depth (x-axis). This plot shows the relationship between sequencing depth and breadth for each read dataset, which can be used to gauge, for example, the likely effect of a minimum depth filter on the fraction of a genome available for analysis.
Created with MultiQC
Insert size histogram
Distribution of estimated insert sizes of mapped reads.
To overcome limitations in the length of DNA or RNA sequencing reads, many sequencing instruments can produce two or more shorter reads from one longer fragment in which the relative position of reads is approximately known, such as paired-end or mate-pair reads (Mardis 2013). Such techniques can extend the reach of sequencing technology, allowing for more accurate placement of reads (Reinert et al. 2015) and better resolution of repeat regions (Reinert et al. 2015), as well as detection of structural variation (Alkan et al. 2011) and chimeric transcripts (Maher et al. 2009).
All these methods assume that the approximate size of an insert is known. (Insert size can be defined as the length in bases of a sequenced DNA or RNA fragment, excluding technical sequences such as adapters, which are typically removed before alignment.) This plot allows for that assumption to be assessed. With the set of mapped fragments for a given sample, QualiMap groups the fragments by insert size, then plots the frequency of mapped fragments (y-axis) over a range of insert sizes (x-axis). In an ideal case, the distribution of fragment sizes for a sequencing library would culminate in a single peak indicating average insert size, with a narrow spread indicating highly consistent fragment lengths.
QualiMap calculates insert sizes as follows: for each fragment in which
every read mapped successfully to the same reference sequence, it
extracts the insert size from the TLEN field of the leftmost read
(see the Qualimap 2 documentation), where the TLEN (or
'observed Template LENgth') field contains 'the number of bases from the
leftmost mapped base to the rightmost mapped base'
(SAM
format specification). Note that because it is defined in terms of
alignment to a reference sequence, the value of the TLEN field may
differ from the insert size due to factors such as alignment clipping,
alignment errors, or structural variation or splicing in a gap between
reads from the same fragment.
Created with MultiQC
GC content distribution
Each solid line represents the distribution of GC content of mapped reads for a given sample.
GC bias is the difference between the guanine-cytosine content (GC-content) of a set of sequencing reads and the GC-content of the DNA or RNA in the original sample. It is a well-known issue with sequencing systems, and may be introduced by PCR amplification, among other factors (Benjamini & Speed 2012; Ross et al. 2013).
QualiMap calculates the GC-content of individual mapped reads, then groups those reads by their GC-content (1%, 2%, …, 100%), and plots the frequency of mapped reads (y-axis) at each level of GC-content (x-axis). This plot shows the GC-content distribution of mapped reads for each read dataset, which should ideally resemble that of the original sample. It can be useful to display the GC-content distribution of an appropriate reference sequence for comparison, and QualiMap has an option to do this (see the Qualimap 2 documentation).
Created with MultiQC
Mosdepth
Fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing.URL: https://github.com/brentp/mosdepthDOI: 10.1093/bioinformatics/btx699
Cumulative coverage distribution
Proportion of bases in the reference genome with, at least, a given depth of coverage. Note that for 469 samples, a BED file was provided, so the data was calculated across those regions. For 469 samples, it's calculated across the entire genome length. 469 samples have both global and region reports, and we are showing the data for regions
For a set of DNA or RNA reads mapped to a reference sequence, such as a genome or transcriptome, the depth of coverage at a given base position is the number of high-quality reads that map to the reference at that position, while the breadth of coverage is the fraction of the reference sequence to which reads have been mapped with at least a given depth of coverage (Sims et al. 2014).
Defining coverage breadth in terms of coverage depth is useful, because sequencing experiments typically require a specific minimum depth of coverage over the region of interest (Sims et al. 2014), so the extent of the reference sequence that is amenable to analysis is constrained to lie within regions that have sufficient depth. With inadequate sequencing breadth, it can be difficult to distinguish the absence of a biological feature (such as a gene) from a lack of data (Green 2007).
For increasing coverage depths (1×, 2×, …, N×), coverage breadth is calculated as the percentage of the reference sequence that is covered by at least that number of reads, then plots coverage breadth (y-axis) against coverage depth (x-axis). This plot shows the relationship between sequencing depth and breadth for each read dataset, which can be used to gauge, for example, the likely effect of a minimum depth filter on the fraction of a genome available for analysis.
Created with MultiQC
Average coverage per contig
Average coverage per contig or chromosome
Created with MultiQC
XY coverage
goleft indexcov
Quickly estimate coverage from a whole-genome bam index, providing 16KB resolution.URL: https://github.com/brentp/goleft/tree/master/indexcovDOI: 10.1093/gigascience/gix090
This is useful as a quick QC to get coverage values across the genome.Scaled coverage ROC plot
Coverage (ROC) plot that shows genome coverage at given (scaled) depth.
Lower coverage samples have shorter curves where the proportion of regions covered drops off more quickly. This indicates a higher fraction of low coverage regions.
Created with MultiQC
Problem coverage bins
This plot identifies problematic samples using binned coverage distributions.
We expect bins to be around 1, so deviations from this indicate problems.
Low coverage bins (< 0.15) on the x-axis have regions with low or missing coverage.
Higher values indicate truncated BAM files or missing data.
Bins with skewed distributions (<0.85 or >1.15) on the y-axis detect dosage bias.
Large values on the y-axis are likely to impact CNV and structural variant calling.
See the goleft indexcov bin documentation
for more details.
Created with MultiQC
FastQC
Version:
0.11.9
Quality control tool for high throughput sequencing data.URL: http://www.bioinformatics.babraham.ac.uk/projects/fastqc
Sequence Counts
Sequence counts for each sample. Duplicate read counts are an estimate only.
This plot show the total number of reads, broken down into unique and duplicate if possible (only more recent versions of FastQC give duplicate info).
You can read more about duplicate calculation in the FastQC documentation. A small part has been copied here for convenience:
Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.
The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.
Sequence Quality Histograms
The mean quality value across each base position in the read.
To enable multiple samples to be plotted on the same graph, only the mean quality scores are plotted (unlike the box plots seen in FastQC reports).
Taken from the FastQC help:
The y-axis on the graph shows the quality scores. The higher the score, the better the base call. The background of the graph divides the y axis into very good quality calls (green), calls of reasonable quality (orange), and calls of poor quality (red). The quality of calls on most platforms will degrade as the run progresses, so it is common to see base calls falling into the orange area towards the end of a read.
Created with MultiQC
Per Sequence Quality Scores
The number of reads with average quality scores. Shows if a subset of reads has poor quality.
From the FastQC help:
The per sequence quality score report allows you to see if a subset of your sequences have universally low quality values. It is often the case that a subset of sequences will have universally poor quality, however these should represent only a small percentage of the total sequences.
Created with MultiQC
Per Base Sequence Content
The proportion of each base position for which each of the four normal DNA bases has been called.
To enable multiple samples to be shown in a single plot, the base composition data is shown as a heatmap. The colours represent the balance between the four bases: an even distribution should give an even muddy brown colour. Hover over the plot to see the percentage of the four bases under the cursor.
To see the data as a line plot, as in the original FastQC graph, click on a sample track.
From the FastQC help:
Per Base Sequence Content plots out the proportion of each base position in a file for which each of the four normal DNA bases has been called.
In a random library you would expect that there would be little to no difference between the different bases of a sequence run, so the lines in this plot should run parallel with each other. The relative amount of each base should reflect the overall amount of these bases in your genome, but in any case they should not be hugely imbalanced from each other.
It's worth noting that some types of library will always produce biased sequence composition, normally at the start of the read. Libraries produced by priming using random hexamers (including nearly all RNA-Seq libraries) and those which were fragmented using transposases inherit an intrinsic bias in the positions at which reads start. This bias does not concern an absolute sequence, but instead provides enrichement of a number of different K-mers at the 5' end of the reads. Whilst this is a true technical bias, it isn't something which can be corrected by trimming and in most cases doesn't seem to adversely affect the downstream analysis.
Click a sample row to see a line plot for that dataset.
Rollover for sample name
Position: -
%T: -
%C: -
%A: -
%G: -
Per Sequence GC Content
The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content.
From the FastQC help:
This module measures the GC content across the whole length of each sequence in a file and compares it to a modelled normal distribution of GC content.
In a normal random library you would expect to see a roughly normal distribution of GC content where the central peak corresponds to the overall GC content of the underlying genome. Since we don't know the GC content of the genome the modal GC content is calculated from the observed data and used to build a reference distribution.
An unusually shaped distribution could indicate a contaminated library or some other kinds of biased subset. A normal distribution which is shifted indicates some systematic bias which is independent of base position. If there is a systematic bias which creates a shifted normal distribution then this won't be flagged as an error by the module since it doesn't know what your genome's GC content should be.
Created with MultiQC
Per Base N Content
The percentage of base calls at each position for which an N was called.
From the FastQC help:
If a sequencer is unable to make a base call with sufficient confidence then it will
normally substitute an N rather than a conventional base call. This graph shows the
percentage of base calls at each position for which an N was called.
It's not unusual to see a very low proportion of Ns appearing in a sequence, especially nearer the end of a sequence. However, if this proportion rises above a few percent it suggests that the analysis pipeline was unable to interpret the data well enough to make valid base calls.
Created with MultiQC
Sequence Length Distribution
All samples have sequences of a single length (151bp)
Sequence Duplication Levels
The relative level of duplication found for every sequence.
From the FastQC Help:
In a diverse library most sequences will occur only once in the final set. A low level of duplication may indicate a very high level of coverage of the target sequence, but a high level of duplication is more likely to indicate some kind of enrichment bias (e.g. PCR over amplification). This graph shows the degree of duplication for every sequence in a library: the relative number of sequences with different degrees of duplication.
Only sequences which first appear in the first 100,000 sequences in each file are analysed. This should be enough to get a good impression for the duplication levels in the whole file. Each sequence is tracked to the end of the file to give a representative count of the overall duplication level.
The duplication detection requires an exact sequence match over the whole length of the sequence. Any reads over 75bp in length are truncated to 50bp for this analysis.
In a properly diverse library most sequences should fall into the far left of the plot in both the red and blue lines. A general level of enrichment, indicating broad oversequencing in the library will tend to flatten the lines, lowering the low end and generally raising other categories. More specific enrichments of subsets, or the presence of low complexity contaminants will tend to produce spikes towards the right of the plot.
Created with MultiQC
Overrepresented sequences by sample
The total amount of overrepresented sequences found in each library.
FastQC calculates and lists overrepresented sequences in FastQ files. It would not be possible to show this for all samples in a MultiQC report, so instead this plot shows the number of sequences categorized as overrepresented.
Sometimes, a single sequence may account for a large number of reads in a dataset. To show this, the bars are split into two: the first shows the overrepresented reads that come from the single most common sequence. The second shows the total count from all remaining overrepresented sequences.
From the FastQC Help:
A normal high-throughput library will contain a diverse set of sequences, with no individual sequence making up a tiny fraction of the whole. Finding that a single sequence is very overrepresented in the set either means that it is highly biologically significant, or indicates that the library is contaminated, or not as diverse as you expected.
FastQC lists all the sequences which make up more than 0.1% of the total. To conserve memory only sequences which appear in the first 100,000 sequences are tracked to the end of the file. It is therefore possible that a sequence which is overrepresented but doesn't appear at the start of the file for some reason could be missed by this module.
14 samples had less than 1% of reads made up of overrepresented sequences
Top overrepresented sequences
Top overrepresented sequences across all samples. The table shows 20 most overrepresented sequences across all samples, ranked by the number of samples they occur in.
Showing 0/0 rows.
| Overrepresented sequence |
|---|
Adapter Content
The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position.
Note that only samples with ≥ 0.1% adapter contamination are shown.
There may be several lines per sample, as one is shown for each adapter detected in the file.
From the FastQC Help:
The plot shows a cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. Once a sequence has been seen in a read it is counted as being present right through to the end of the read so the percentages you see will only increase as the read length goes on.
Created with MultiQC
Status Checks
Status for each FastQC section showing whether results seem entirely normal (green), slightly abnormal (orange) or very unusual (red).
FastQC assigns a status for each section of the report. These give a quick evaluation of whether the results of the analysis seem entirely normal (green), slightly abnormal (orange) or very unusual (red).
It is important to stress that although the analysis results appear to give a pass/fail result, these evaluations must be taken in the context of what you expect from your library. A 'normal' sample as far as FastQC is concerned is random and diverse. Some experiments may be expected to produce libraries which are biased in particular ways. You should treat the summary evaluations therefore as pointers to where you should concentrate your attention and understand why your library may not look random and diverse.
Specific guidance on how to interpret the output of each module can be found in the relevant report section, or in the FastQC help.
In this heatmap, we summarise all of these into a single heatmap for a quick overview. Note that not all FastQC sections have plots in MultiQC reports, but all status checks are shown in this heatmap.
Created with MultiQC
Bcftools
Version:
1.21
Utilities for variant calling and manipulating VCFs and BCFs.URL: https://samtools.github.io/bcftoolsDOI: 10.1093/gigascience/giab008
Variant Substitution Types
Variant Quality
Created with MultiQC
Indel Distribution
Created with MultiQC
Variant depths
Read depth support distribution for called variants
Created with MultiQC
Alignstats Data
Alignstats Data.
Showing 0/15 rows and 166/166 columns.
| sample | aligner | AlignedBases | AlignedBasesPct | AlignedReadLengthMean | AlignedReadLengthMedian | AlignedReadLengthMode | AlignedReadLengthStandardDeviation | ChimericReadPairPct | DeletedBases | DeletedBasesPct | DuplicateBases | DuplicateBasesPct | DuplicateReads | DuplicateReadsPct | FilteredRecords | FilteredRecordsPct | InputFileName | InputFileSize | InsertSizeMean | InsertSizeMedian | InsertSizeMode | InsertSizeStandardDeviation | InsertedBases | InsertedBasesPct | MappedBases | MappedBasesPct | MappedReads | MappedReadsPct | MatchedBases | MatchedBasesPct | MismatchedBases | MismatchedBasesPct | PerfectBases | PerfectBasesPct | PerfectReads | PerfectReadsPct | Q20Bases | Q20BasesPct | R1AlignedBases | R1AlignedBasesPct | R1AlignedReadLengthMean | R1AlignedReadLengthMedian | R1AlignedReadLengthMode | R1AlignedReadLengthStandardDeviation | R1DeletedBases | R1DeletedBasesPct | R1InsertedBases | R1InsertedBasesPct | R1MappedBases | R1MappedBasesPct | R1MappedReads | R1MappedReadsPct | R1MatchedBases | R1MatchedBasesPct | R1MismatchedBases | R1MismatchedBasesPct | R1PerfectBases | R1PerfectBasesPct | R1PerfectReads | R1PerfectReadsPct | R1Q20Bases | R1Q20BasesPct | R1SoftClippedBases | R1SoftClippedBasesPct | R1SoftClippedReads | R1SoftClippedReadsPct | R1UnmappedBases | R1UnmappedBasesPct | R1UnmappedReads | R1UnmappedReadsPct | R1UnpairedReads | R1UnpairedReadsPct | R1YieldBases | R1YieldReads | R2AlignedBases | R2AlignedBasesPct | R2AlignedReadLengthMean | R2AlignedReadLengthMedian | R2AlignedReadLengthMode | R2AlignedReadLengthStandardDeviation | R2DeletedBases | R2DeletedBasesPct | R2InsertedBases | R2InsertedBasesPct | R2MappedBases | R2MappedBasesPct | R2MappedReads | R2MappedReadsPct | R2MatchedBases | R2MatchedBasesPct | R2MismatchedBases | R2MismatchedBasesPct | R2PerfectBases | R2PerfectBasesPct | R2PerfectReads | R2PerfectReadsPct | R2Q20Bases | R2Q20BasesPct | R2SoftClippedBases | R2SoftClippedBasesPct | R2SoftClippedReads | R2SoftClippedReadsPct | R2UnmappedBases | R2UnmappedBasesPct | R2UnmappedReads | R2UnmappedReadsPct | R2UnpairedReads | R2UnpairedReadsPct | R2YieldBases | R2YieldReads | SoftClippedBases | SoftClippedBasesPct | SoftClippedReads | SoftClippedReadsPct | TotalPairs | TotalRecords | TotalSameChrPairs | TotalSameChrPairsPct | UnfilteredRecords | UnfilteredRecordsPct | UnmappedBases | UnmappedBasesPct | UnmappedReads | UnmappedReadsPct | UnpairedReads | UnpairedReadsPct | WgsAlignedReads | WgsAlignedReadsPct | WgsCalculatedAlignedReads | WgsCovDuplicateReads | WgsCovDuplicateReadsPct | WgsCoverageBases1 | WgsCoverageBases10 | WgsCoverageBases100 | WgsCoverageBases1000 | WgsCoverageBases1000Pct | WgsCoverageBases100Pct | WgsCoverageBases10Pct | WgsCoverageBases15 | WgsCoverageBases15Pct | WgsCoverageBases1Pct | WgsCoverageBases20 | WgsCoverageBases20Pct | WgsCoverageBases30 | WgsCoverageBases30Pct | WgsCoverageBases40 | WgsCoverageBases40Pct | WgsCoverageBases50 | WgsCoverageBases500 | WgsCoverageBases500Pct | WgsCoverageBases50Pct | WgsCoverageBases60 | WgsCoverageBases60Pct | WgsCoverageBases70 | WgsCoverageBases70Pct | WgsCoverageMean | WgsCoverageMedian | WgsCoverageStandardDeviation | WgsExpectedAlignedReads | WgsFilteredLowBaseQualityBases | WgsFilteredOverlapBases | WgsReadsPaired | WgsReadsPairedWithMates | WgsTotalReads | YieldBases | YieldReads |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| RIH0_ANA0-HG003-19_bwa2a | bwa2a | 106,587,588,486.0 | 97.6 | 148.4 | 151.0 | 151.0 | 14.5 | 1.9 | 38,661,688.0 | 0.0 | 10,746,032,025.0 | 9.9 | 71,165,775.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG003-19/align/bwa2a/RIH0_ANA0-HG003-19.bwa2a.mrkdup.sort.bam | 41,646,135,899.0 | 423.2 | 385.0 | 286.0 | 181.6 | 37,607,745.0 | 0.0 | 108,698,689,068.0 | 99.6 | 719,858,868.0 | 99.6 | 105,952,010,131.0 | 99.4 | 597,970,610.0 | 0.6 | 74,818,617,023.0 | 68.8 | 498,923,660.0 | 69.3 | 103,414,422,222.0 | 97.0 | 53,540,396,557.0 | 98.2 | 148.9 | 151.0 | 151.0 | 12.7 | 19,538,628.0 | 0.0 | 18,771,739.0 | 0.0 | 54,381,552,532.0 | 99.7 | 360,142,732.0 | 99.7 | 53,268,696,236.0 | 99.5 | 252,928,582.0 | 0.5 | 38,985,664,069.0 | 71.7 | 259,576,972.0 | 72.1 | 52,192,384,702.0 | 97.5 | 574,206,699.0 | 1.1 | 13,916,316.0 | 3.9 | 141,191,342.0 | 0.3 | 935,042.0 | 0.3 | 1,392,655.0 | 0.4 | 54,522,743,874.0 | 361,077,774.0 | 53,047,191,929.0 | 97.1 | 147.8 | 151.0 | 151.0 | 16.0 | 19,123,060.0 | 0.0 | 18,836,006.0 | 0.0 | 54,317,136,536.0 | 99.4 | 359,716,136.0 | 99.4 | 52,683,313,895.0 | 99.3 | 345,042,028.0 | 0.7 | 35,832,952,954.0 | 66.0 | 239,346,688.0 | 66.5 | 51,222,037,520.0 | 96.6 | 884,994,267.0 | 1.6 | 19,599,294.0 | 5.4 | 323,608,402.0 | 0.6 | 2,143,102.0 | 0.6 | 212,480.0 | 0.1 | 54,640,744,938.0 | 361,859,238.0 | 1,459,200,966.0 | 1.3 | 33,515,610.0 | 4.7 | 359,503,656.0 | 722,937,012.0 | 352,854,105.0 | 97.5 | 722,937,012.0 | 100.0 | 464,799,744.0 | 0.4 | 3,078,144.0 | 0.4 | 750,447.0 | 0.2 | 715,541,652.0 | 99.0 | 644,375,877.0 | 71,165,775.0 | 9.8 | 2,929,410,819.0 | 2,899,543,317.0 | 9,138,440.0 | 850,204.0 | 0.0 | 0.3 | 93.5 | 2,826,553,915.0 | 91.2 | 94.5 | 2,697,671,819.0 | 87.0 | 1,768,568,275.0 | 57.1 | 404,762,087.0 | 13.1 | 53,709,656.0 | 1,384,285.0 | 0.0 | 1.7 | 23,537,318.0 | 0.8 | 17,151,499.0 | 0.6 | 31.0 | 31.0 | 139.7 | 715,541,652.0 | 0.0 | 0.0 | 715,541,652.0 | 713,964,402.0 | 722,937,012.0 | 109,163,488,812.0 | 722,937,012.0 |
| RIH0_ANA0-HG003-19_sent | sent | 106,551,432,212.0 | 97.6 | 148.3 | 151.0 | 151.0 | 14.6 | 1.9 | 39,234,733.0 | 0.0 | 10,726,236,378.0 | 9.9 | 71,034,678.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG003-19/align/sent/RIH0_ANA0-HG003-19.sent.mrkdup.sort.bam | 42,519,220,955.0 | 423.3 | 385.0 | 286.0 | 181.9 | 36,545,872.0 | 0.0 | 108,704,781,465.0 | 99.5 | 719,899,215.0 | 99.5 | 105,920,944,439.0 | 99.4 | 593,941,901.0 | 0.6 | 74,862,949,479.0 | 68.9 | 499,274,385.0 | 69.4 | 103,383,982,786.0 | 97.0 | 53,524,612,871.0 | 98.1 | 148.9 | 151.0 | 151.0 | 12.9 | 19,810,358.0 | 0.0 | 18,243,991.0 | 0.0 | 54,386,491,289.0 | 99.7 | 360,175,439.0 | 99.7 | 53,255,259,746.0 | 99.5 | 251,109,134.0 | 0.5 | 39,005,745,760.0 | 71.7 | 259,720,139.0 | 72.1 | 52,178,389,699.0 | 97.5 | 578,725,483.0 | 1.1 | 14,147,379.0 | 3.9 | 152,456,244.0 | 0.3 | 1,009,644.0 | 0.3 | 1,479,713.0 | 0.4 | 54,538,947,533.0 | 361,185,083.0 | 53,026,819,341.0 | 97.0 | 147.8 | 151.0 | 151.0 | 16.2 | 19,424,375.0 | 0.0 | 18,301,881.0 | 0.0 | 54,318,290,176.0 | 99.4 | 359,723,776.0 | 99.4 | 52,665,684,693.0 | 99.3 | 342,832,767.0 | 0.6 | 35,857,203,719.0 | 66.0 | 239,554,246.0 | 66.6 | 51,205,593,087.0 | 96.6 | 884,807,148.0 | 1.6 | 19,825,910.0 | 5.5 | 344,168,109.0 | 0.6 | 2,279,259.0 | 0.6 | 240,556.0 | 0.1 | 54,662,458,285.0 | 362,003,035.0 | 1,463,532,631.0 | 1.3 | 33,973,289.0 | 4.7 | 359,483,220.0 | 723,188,118.0 | 352,773,009.0 | 97.5 | 723,188,118.0 | 100.0 | 496,624,353.0 | 0.5 | 3,288,903.0 | 0.5 | 799,546.0 | 0.2 | 715,330,893.0 | 98.9 | 644,296,215.0 | 71,034,678.0 | 9.8 | 2,929,664,886.0 | 2,899,629,494.0 | 9,385,650.0 | 837,695.0 | 0.0 | 0.3 | 93.5 | 2,826,467,713.0 | 91.2 | 94.5 | 2,697,395,744.0 | 87.0 | 1,767,890,264.0 | 57.0 | 404,281,644.0 | 13.0 | 53,763,440.0 | 1,380,608.0 | 0.0 | 1.7 | 23,835,709.0 | 0.8 | 17,515,612.0 | 0.6 | 31.0 | 31.0 | 135.4 | 715,330,893.0 | 0.0 | 0.0 | 715,330,893.0 | 713,641,082.0 | 723,188,118.0 | 109,201,405,818.0 | 723,188,118.0 |
| RIH0_ANA0-HG003-19_strobe | strobe | 106,063,420,473.0 | 97.5 | 119.3 | 151.0 | 151.0 | 63.2 | 2.4 | 64,445,803.0 | 0.1 | 10,587,760,771.0 | 9.9 | 70,117,621.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG003-19/align/strobe/RIH0_ANA0-HG003-19.strobe.mrkdup.sort.bam | 40,230,420,500.0 | 425.4 | 386.0 | 286.0 | 181.8 | 63,732,197.0 | 0.1 | 107,216,367,821.0 | 98.6 | 878,546,383.0 | 98.9 | 105,416,822,229.0 | 99.4 | 582,866,047.0 | 0.5 | 74,881,422,494.0 | 69.8 | 498,540,419.0 | 56.7 | 102,993,847,324.0 | 97.1 | 53,289,704,491.0 | 98.1 | 119.6 | 151.0 | 151.0 | 62.9 | 29,960,644.0 | 0.1 | 30,794,272.0 | 0.1 | 53,749,180,991.0 | 99.0 | 440,631,726.0 | 99.2 | 53,013,002,700.0 | 99.5 | 245,907,519.0 | 0.5 | 39,027,158,364.0 | 72.6 | 259,521,865.0 | 58.9 | 51,986,628,298.0 | 97.6 | 459,476,500.0 | 0.9 | 12,766,315.0 | 2.9 | 556,386,378.0 | 1.0 | 3,684,678.0 | 0.8 | 3,243,673.0 | 0.7 | 54,305,567,369.0 | 444,316,404.0 | 52,773,715,982.0 | 97.0 | 119.0 | 151.0 | 151.0 | 63.4 | 34,485,159.0 | 0.1 | 32,937,925.0 | 0.1 | 53,467,186,830.0 | 98.2 | 437,914,657.0 | 98.6 | 52,403,819,529.0 | 99.3 | 336,958,528.0 | 0.6 | 35,854,264,130.0 | 67.1 | 239,018,554.0 | 54.6 | 51,007,219,026.0 | 96.7 | 693,470,848.0 | 1.3 | 17,373,660.0 | 4.0 | 966,663,797.0 | 1.8 | 6,401,747.0 | 1.4 | 526,604.0 | 0.1 | 54,433,850,627.0 | 444,316,404.0 | 1,152,947,348.0 | 1.1 | 30,139,975.0 | 3.4 | 437,388,053.0 | 888,632,808.0 | 426,770,592.0 | 96.1 | 888,632,808.0 | 100.0 | 1,523,050,175.0 | 1.4 | 10,086,425.0 | 1.1 | 3,158,074.0 | 0.7 | 710,042,171.0 | 79.9 | 639,924,550.0 | 70,117,621.0 | 7.9 | 2,929,934,077.0 | 2,898,454,660.0 | 9,392,192.0 | 827,811.0 | 0.0 | 0.3 | 93.5 | 2,824,109,019.0 | 91.1 | 94.5 | 2,693,224,801.0 | 86.9 | 1,753,138,646.0 | 56.6 | 395,213,641.0 | 12.7 | 51,846,165.0 | 1,395,868.0 | 0.0 | 1.7 | 23,079,640.0 | 0.7 | 17,080,448.0 | 0.6 | 30.8 | 31.0 | 127.4 | 710,042,171.0 | 0.0 | 0.0 | 710,042,171.0 | 707,780,694.0 | 888,632,808.0 | 108,739,417,996.0 | 888,632,808.0 |
| RIH0_ANA0-HG004-19_bwa2a | bwa2a | 107,234,311,923.0 | 98.0 | 148.7 | 151.0 | 151.0 | 13.4 | 1.8 | 38,999,641.0 | 0.0 | 10,786,156,349.0 | 9.9 | 71,431,499.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG004-19/align/bwa2a/RIH0_ANA0-HG004-19.bwa2a.mrkdup.sort.bam | 40,984,429,468.0 | 404.4 | 368.0 | 285.0 | 170.6 | 39,468,075.0 | 0.0 | 109,139,815,938.0 | 99.7 | 722,780,238.0 | 99.7 | 106,629,372,765.0 | 99.4 | 565,471,083.0 | 0.5 | 76,310,557,532.0 | 69.9 | 508,323,230.0 | 70.3 | 104,221,739,232.0 | 97.2 | 53,817,592,179.0 | 98.4 | 149.1 | 151.0 | 151.0 | 11.9 | 19,721,527.0 | 0.0 | 19,906,990.0 | 0.0 | 54,599,053,989.0 | 99.9 | 361,583,139.0 | 99.9 | 53,553,408,643.0 | 99.5 | 244,276,546.0 | 0.5 | 39,518,598,351.0 | 72.4 | 262,927,448.0 | 72.7 | 52,500,027,088.0 | 97.6 | 507,185,259.0 | 0.9 | 13,461,548.0 | 3.7 | 75,926,273.0 | 0.1 | 502,823.0 | 0.1 | 1,079,813.0 | 0.3 | 54,674,980,262.0 | 362,085,962.0 | 53,416,719,744.0 | 97.5 | 148.2 | 151.0 | 151.0 | 14.7 | 19,278,114.0 | 0.0 | 19,561,085.0 | 0.0 | 54,540,761,949.0 | 99.6 | 361,197,099.0 | 99.6 | 53,075,964,122.0 | 99.4 | 321,194,537.0 | 0.6 | 36,791,959,181.0 | 67.5 | 245,395,782.0 | 67.9 | 51,721,712,144.0 | 96.8 | 762,480,708.0 | 1.4 | 18,266,394.0 | 5.1 | 221,503,259.0 | 0.4 | 1,466,909.0 | 0.4 | 134,304.0 | 0.0 | 54,762,265,208.0 | 362,664,008.0 | 1,269,665,967.0 | 1.2 | 31,727,942.0 | 4.4 | 361,062,795.0 | 724,749,970.0 | 354,723,860.0 | 97.8 | 724,749,970.0 | 100.0 | 297,429,532.0 | 0.3 | 1,969,732.0 | 0.3 | 387,096.0 | 0.1 | 718,569,390.0 | 99.1 | 647,137,891.0 | 71,431,499.0 | 9.9 | 2,911,069,375.0 | 2,889,208,594.0 | 8,440,601.0 | 743,489.0 | 0.0 | 0.3 | 93.2 | 2,871,185,579.0 | 92.6 | 93.9 | 2,796,389,634.0 | 90.2 | 1,791,722,660.0 | 57.8 | 396,158,774.0 | 12.8 | 52,719,643.0 | 1,219,373.0 | 0.0 | 1.7 | 22,408,263.0 | 0.7 | 16,056,914.0 | 0.5 | 31.1 | 31.0 | 128.7 | 718,569,390.0 | 0.0 | 0.0 | 718,569,390.0 | 717,373,850.0 | 724,749,970.0 | 109,437,245,470.0 | 724,749,970.0 |
| RIH0_ANA0-HG004-19_sent | sent | 107,200,856,304.0 | 97.9 | 148.6 | 151.0 | 151.0 | 13.6 | 1.8 | 39,657,567.0 | 0.0 | 10,762,468,224.0 | 9.9 | 71,274,624.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG004-19/align/sent/RIH0_ANA0-HG004-19.sent.mrkdup.sort.bam | 41,849,303,481.0 | 404.4 | 368.0 | 285.0 | 170.8 | 38,171,173.0 | 0.0 | 109,164,954,871.0 | 99.7 | 722,946,721.0 | 99.7 | 106,601,257,103.0 | 99.4 | 561,428,028.0 | 0.5 | 76,347,590,406.0 | 69.9 | 508,647,028.0 | 70.4 | 104,193,435,539.0 | 97.2 | 53,802,806,572.0 | 98.4 | 149.0 | 151.0 | 151.0 | 12.1 | 20,039,038.0 | 0.0 | 19,300,672.0 | 0.0 | 54,613,800,347.0 | 99.9 | 361,680,797.0 | 99.9 | 53,541,054,588.0 | 99.5 | 242,451,312.0 | 0.5 | 39,535,673,196.0 | 72.4 | 263,068,061.0 | 72.7 | 52,486,874,205.0 | 97.6 | 519,025,007.0 | 1.0 | 13,724,176.0 | 3.8 | 78,872,132.0 | 0.1 | 522,332.0 | 0.1 | 1,138,026.0 | 0.3 | 54,692,672,479.0 | 362,203,129.0 | 53,398,049,732.0 | 97.5 | 148.2 | 151.0 | 151.0 | 14.9 | 19,618,529.0 | 0.0 | 18,870,501.0 | 0.0 | 54,551,154,524.0 | 99.6 | 361,265,924.0 | 99.6 | 53,060,202,515.0 | 99.4 | 318,976,716.0 | 0.6 | 36,811,917,210.0 | 67.5 | 245,578,967.0 | 68.0 | 51,706,561,334.0 | 96.8 | 770,909,598.0 | 1.4 | 18,537,078.0 | 5.1 | 231,744,381.0 | 0.4 | 1,534,731.0 | 0.4 | 146,349.0 | 0.0 | 54,782,898,905.0 | 362,800,655.0 | 1,289,934,605.0 | 1.2 | 32,261,254.0 | 4.5 | 361,119,575.0 | 725,003,784.0 | 354,693,549.0 | 97.8 | 725,003,784.0 | 100.0 | 310,616,513.0 | 0.3 | 2,057,063.0 | 0.3 | 396,705.0 | 0.1 | 718,482,059.0 | 99.1 | 647,207,435.0 | 71,274,624.0 | 9.8 | 2,911,276,958.0 | 2,889,376,451.0 | 8,525,874.0 | 737,351.0 | 0.0 | 0.3 | 93.2 | 2,871,218,732.0 | 92.6 | 93.9 | 2,796,232,450.0 | 90.2 | 1,791,269,783.0 | 57.8 | 395,932,309.0 | 12.8 | 52,957,046.0 | 1,215,597.0 | 0.0 | 1.7 | 22,758,951.0 | 0.7 | 16,348,296.0 | 0.5 | 31.1 | 31.0 | 124.6 | 718,482,059.0 | 0.0 | 0.0 | 718,482,059.0 | 717,218,406.0 | 725,003,784.0 | 109,475,571,384.0 | 725,003,784.0 |
| RIH0_ANA0-HG004-19_strobe | strobe | 106,828,179,508.0 | 98.0 | 120.9 | 151.0 | 151.0 | 61.9 | 2.3 | 65,525,448.0 | 0.1 | 10,646,981,159.0 | 9.9 | 70,509,809.0 | 9.9 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG004-19/align/strobe/RIH0_ANA0-HG004-19.strobe.mrkdup.sort.bam | 39,492,717,952.0 | 406.7 | 369.0 | 285.0 | 171.4 | 67,346,785.0 | 0.1 | 107,925,375,788.0 | 99.0 | 874,247,248.0 | 99.2 | 106,199,819,420.0 | 99.4 | 561,013,303.0 | 0.5 | 76,372,163,099.0 | 70.8 | 508,335,215.0 | 58.1 | 103,902,441,058.0 | 97.3 | 53,625,048,422.0 | 98.5 | 121.2 | 151.0 | 151.0 | 61.6 | 31,173,242.0 | 0.1 | 33,522,729.0 | 0.1 | 54,074,891,011.0 | 99.3 | 438,222,373.0 | 99.5 | 53,348,453,229.0 | 99.5 | 243,072,464.0 | 0.5 | 39,557,738,043.0 | 73.2 | 263,043,771.0 | 60.0 | 52,345,027,066.0 | 97.6 | 449,842,589.0 | 0.8 | 12,970,424.0 | 3.0 | 361,016,387.0 | 0.7 | 2,390,837.0 | 0.5 | 2,587,191.0 | 0.6 | 54,435,907,398.0 | 440,613,210.0 | 53,203,131,086.0 | 97.5 | 120.6 | 151.0 | 151.0 | 62.1 | 34,352,206.0 | 0.1 | 33,824,056.0 | 0.1 | 53,850,484,777.0 | 98.7 | 436,024,875.0 | 99.0 | 52,851,366,191.0 | 99.3 | 317,940,839.0 | 0.6 | 36,814,425,056.0 | 68.4 | 245,291,444.0 | 56.3 | 51,557,413,992.0 | 96.9 | 647,353,691.0 | 1.2 | 16,952,340.0 | 3.9 | 692,838,585.0 | 1.3 | 4,588,335.0 | 1.0 | 389,693.0 | 0.1 | 54,543,323,362.0 | 440,613,210.0 | 1,097,196,280.0 | 1.0 | 29,922,764.0 | 3.4 | 435,635,182.0 | 881,226,420.0 | 425,234,876.0 | 96.5 | 881,226,420.0 | 100.0 | 1,053,854,972.0 | 1.0 | 6,979,172.0 | 0.8 | 2,001,144.0 | 0.5 | 714,737,588.0 | 81.1 | 644,227,779.0 | 70,509,809.0 | 8.0 | 2,911,802,133.0 | 2,888,366,015.0 | 8,545,098.0 | 741,619.0 | 0.0 | 0.3 | 93.2 | 2,869,232,283.0 | 92.6 | 93.9 | 2,792,202,175.0 | 90.1 | 1,777,704,016.0 | 57.3 | 388,052,018.0 | 12.5 | 51,218,255.0 | 1,238,787.0 | 0.0 | 1.7 | 22,073,234.0 | 0.7 | 15,980,737.0 | 0.5 | 31.0 | 31.0 | 119.7 | 714,737,588.0 | 0.0 | 0.0 | 714,737,588.0 | 712,938,330.0 | 881,226,420.0 | 108,979,230,760.0 | 881,226,420.0 |
| RIH0_ANA0-HG005-19_bwa2a | bwa2a | 107,848,080,470.0 | 97.8 | 148.5 | 151.0 | 151.0 | 13.9 | 1.8 | 40,217,234.0 | 0.0 | 11,830,058,307.0 | 10.8 | 78,344,757.0 | 10.8 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG005-19/align/bwa2a/RIH0_ANA0-HG005-19.bwa2a.mrkdup.sort.bam | 41,296,763,105.0 | 399.2 | 364.0 | 282.0 | 167.7 | 39,926,784.0 | 0.0 | 109,877,325,608.0 | 99.7 | 727,664,408.0 | 99.7 | 107,227,936,320.0 | 99.4 | 580,217,366.0 | 0.5 | 76,204,995,399.0 | 69.4 | 508,017,016.0 | 69.8 | 104,790,619,064.0 | 97.2 | 54,133,828,240.0 | 98.3 | 149.0 | 151.0 | 151.0 | 12.4 | 20,339,583.0 | 0.0 | 20,115,736.0 | 0.0 | 54,965,159,680.0 | 99.8 | 364,007,680.0 | 99.8 | 53,862,498,170.0 | 99.5 | 251,214,334.0 | 0.5 | 39,488,525,447.0 | 71.8 | 262,905,770.0 | 72.2 | 52,802,061,637.0 | 97.5 | 559,978,249.0 | 1.0 | 14,283,333.0 | 3.9 | 104,433,865.0 | 0.2 | 691,615.0 | 0.2 | 1,161,881.0 | 0.3 | 55,069,593,545.0 | 364,699,295.0 | 53,714,252,230.0 | 97.4 | 148.1 | 151.0 | 151.0 | 15.3 | 19,877,651.0 | 0.0 | 19,811,048.0 | 0.0 | 54,912,165,928.0 | 99.5 | 363,656,728.0 | 99.5 | 53,365,438,150.0 | 99.4 | 329,003,032.0 | 0.6 | 36,716,469,952.0 | 66.9 | 245,111,246.0 | 67.4 | 51,988,557,427.0 | 96.8 | 826,417,760.0 | 1.5 | 19,162,564.0 | 5.3 | 257,570,364.0 | 0.5 | 1,705,764.0 | 0.5 | 170,277.0 | 0.0 | 55,169,736,292.0 | 365,362,492.0 | 1,386,396,009.0 | 1.3 | 33,445,897.0 | 4.6 | 363,486,451.0 | 730,061,787.0 | 356,995,939.0 | 97.7 | 730,061,787.0 | 100.0 | 362,004,229.0 | 0.3 | 2,397,379.0 | 0.3 | 543,883.0 | 0.1 | 723,407,129.0 | 99.1 | 645,062,372.0 | 78,344,757.0 | 10.7 | 2,929,073,320.0 | 2,897,312,167.0 | 8,815,294.0 | 748,614.0 | 0.0 | 0.3 | 93.5 | 2,824,056,186.0 | 91.1 | 94.5 | 2,694,822,322.0 | 86.9 | 1,766,191,542.0 | 57.0 | 423,769,379.0 | 13.7 | 59,223,126.0 | 1,344,068.0 | 0.0 | 1.9 | 23,841,560.0 | 0.8 | 16,841,016.0 | 0.5 | 31.0 | 31.0 | 137.4 | 723,407,129.0 | 0.0 | 0.0 | 723,407,129.0 | 722,097,516.0 | 730,061,787.0 | 110,239,329,837.0 | 730,061,787.0 |
| RIH0_ANA0-HG005-19_sent | sent | 107,811,177,671.0 | 97.8 | 148.5 | 151.0 | 151.0 | 14.1 | 1.9 | 40,879,609.0 | 0.0 | 11,805,998,269.0 | 10.8 | 78,185,419.0 | 10.8 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG005-19/align/sent/RIH0_ANA0-HG005-19.sent.mrkdup.sort.bam | 42,169,754,243.0 | 399.2 | 364.0 | 282.0 | 167.9 | 38,573,782.0 | 0.0 | 109,894,795,855.0 | 99.6 | 727,780,105.0 | 99.6 | 107,196,724,830.0 | 99.4 | 575,879,059.0 | 0.5 | 76,246,090,419.0 | 69.4 | 508,356,397.0 | 69.9 | 104,759,265,216.0 | 97.2 | 54,117,622,043.0 | 98.2 | 148.9 | 151.0 | 151.0 | 12.6 | 20,661,633.0 | 0.0 | 19,495,127.0 | 0.0 | 54,975,815,901.0 | 99.8 | 364,078,251.0 | 99.8 | 53,848,846,115.0 | 99.5 | 249,280,801.0 | 0.5 | 39,507,178,463.0 | 71.9 | 263,046,695.0 | 72.3 | 52,787,560,163.0 | 97.5 | 567,844,565.0 | 1.0 | 14,528,884.0 | 4.0 | 112,773,746.0 | 0.2 | 746,846.0 | 0.2 | 1,233,764.0 | 0.3 | 55,088,589,647.0 | 364,825,097.0 | 53,693,555,628.0 | 97.3 | 148.0 | 151.0 | 151.0 | 15.5 | 20,217,976.0 | 0.0 | 19,078,655.0 | 0.0 | 54,918,979,954.0 | 99.5 | 363,701,854.0 | 99.5 | 53,347,878,715.0 | 99.4 | 326,598,258.0 | 0.6 | 36,738,911,956.0 | 66.9 | 245,309,702.0 | 67.4 | 51,971,705,053.0 | 96.8 | 830,832,032.0 | 1.5 | 19,415,962.0 | 5.3 | 273,852,694.0 | 0.5 | 1,813,594.0 | 0.5 | 191,726.0 | 0.1 | 55,192,832,648.0 | 365,515,448.0 | 1,398,676,597.0 | 1.3 | 33,944,846.0 | 4.7 | 363,510,128.0 | 730,340,545.0 | 356,929,389.0 | 97.7 | 730,340,545.0 | 100.0 | 386,626,440.0 | 0.4 | 2,560,440.0 | 0.4 | 579,830.0 | 0.2 | 723,244,068.0 | 99.0 | 645,058,649.0 | 78,185,419.0 | 10.7 | 2,929,329,697.0 | 2,897,387,820.0 | 9,058,925.0 | 741,599.0 | 0.0 | 0.3 | 93.5 | 2,823,854,219.0 | 91.1 | 94.5 | 2,694,353,043.0 | 86.9 | 1,765,419,228.0 | 57.0 | 423,361,814.0 | 13.7 | 59,352,002.0 | 1,337,549.0 | 0.0 | 1.9 | 24,213,039.0 | 0.8 | 17,269,795.0 | 0.6 | 31.0 | 31.0 | 133.3 | 723,244,068.0 | 0.0 | 0.0 | 723,244,068.0 | 721,843,288.0 | 730,340,545.0 | 110,281,422,295.0 | 730,340,545.0 |
| RIH0_ANA0-HG005-19_strobe | strobe | 107,370,243,663.0 | 97.8 | 118.5 | 151.0 | 151.0 | 63.6 | 2.4 | 67,210,646.0 | 0.1 | 11,673,745,070.0 | 10.8 | 77,309,570.0 | 10.8 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG005-19/align/strobe/RIH0_ANA0-HG005-19.strobe.mrkdup.sort.bam | 40,088,069,257.0 | 401.7 | 365.0 | 286.0 | 168.5 | 68,030,058.0 | 0.1 | 108,502,326,403.0 | 98.8 | 895,924,071.0 | 99.0 | 106,732,148,674.0 | 99.4 | 570,064,931.0 | 0.5 | 76,266,834,851.0 | 70.3 | 507,769,167.0 | 56.7 | 104,408,974,944.0 | 97.2 | 53,906,515,912.0 | 98.3 | 118.8 | 151.0 | 151.0 | 63.4 | 31,853,627.0 | 0.1 | 33,754,012.0 | 0.1 | 54,370,913,223.0 | 99.1 | 449,147,821.0 | 99.3 | 53,625,591,814.0 | 99.5 | 247,170,086.0 | 0.5 | 39,528,366,566.0 | 72.7 | 262,901,646.0 | 58.5 | 52,616,258,518.0 | 97.6 | 464,397,311.0 | 0.9 | 13,421,373.0 | 3.0 | 471,233,401.0 | 0.9 | 3,120,751.0 | 0.7 | 2,839,154.0 | 0.6 | 54,842,146,624.0 | 452,268,572.0 | 53,463,727,751.0 | 97.3 | 118.2 | 151.0 | 151.0 | 63.9 | 35,357,019.0 | 0.1 | 34,276,046.0 | 0.1 | 54,131,413,180.0 | 98.5 | 446,776,250.0 | 98.8 | 53,106,556,860.0 | 99.3 | 322,894,845.0 | 0.6 | 36,738,468,285.0 | 67.9 | 244,867,521.0 | 54.8 | 51,792,716,426.0 | 96.9 | 667,685,429.0 | 1.2 | 17,407,656.0 | 3.9 | 829,340,622.0 | 1.5 | 5,492,322.0 | 1.2 | 467,583.0 | 0.1 | 54,960,753,802.0 | 452,268,572.0 | 1,132,082,740.0 | 1.0 | 30,829,029.0 | 3.4 | 446,308,667.0 | 904,537,144.0 | 435,557,548.0 | 96.3 | 904,537,144.0 | 100.0 | 1,300,574,023.0 | 1.2 | 8,613,073.0 | 1.0 | 2,653,168.0 | 0.6 | 718,558,453.0 | 79.4 | 641,248,883.0 | 77,309,570.0 | 8.5 | 2,929,592,539.0 | 2,896,345,058.0 | 8,987,639.0 | 744,988.0 | 0.0 | 0.3 | 93.4 | 2,821,651,360.0 | 91.0 | 94.5 | 2,690,334,209.0 | 86.8 | 1,751,737,749.0 | 56.5 | 414,704,662.0 | 13.4 | 57,329,150.0 | 1,354,033.0 | 0.0 | 1.8 | 23,399,209.0 | 0.8 | 16,783,954.0 | 0.5 | 30.9 | 31.0 | 126.2 | 718,558,453.0 | 0.0 | 0.0 | 718,558,453.0 | 716,618,734.0 | 904,537,144.0 | 109,802,900,426.0 | 904,537,144.0 |
| RIH0_ANA0-HG006-19_bwa2a | bwa2a | 104,413,810,086.0 | 95.2 | 146.8 | 151.0 | 151.0 | 17.1 | 3.0 | 43,862,418.0 | 0.0 | 9,957,426,824.0 | 9.3 | 65,943,224.0 | 9.3 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG006-19/align/bwa2a/RIH0_ANA0-HG006-19.bwa2a.mrkdup.sort.bam | 44,431,479,957.0 | 414.3 | 390.0 | 301.0 | 164.2 | 41,114,508.0 | 0.0 | 107,727,421,583.0 | 98.2 | 713,426,633.0 | 98.2 | 103,696,669,892.0 | 99.3 | 676,025,686.0 | 0.6 | 70,633,611,062.0 | 65.6 | 473,409,859.0 | 66.4 | 101,251,885,919.0 | 97.0 | 52,229,920,136.0 | 95.4 | 147.0 | 151.0 | 151.0 | 15.9 | 23,322,925.0 | 0.0 | 20,785,987.0 | 0.0 | 53,811,211,338.0 | 98.3 | 356,365,638.0 | 98.3 | 51,940,676,912.0 | 99.4 | 268,457,237.0 | 0.5 | 37,342,505,518.0 | 69.4 | 250,474,458.0 | 70.3 | 51,066,836,505.0 | 97.8 | 1,189,730,384.0 | 2.2 | 35,046,105.0 | 9.8 | 940,513,466.0 | 1.7 | 6,228,566.0 | 1.7 | 2,051,600.0 | 0.6 | 54,751,724,804.0 | 362,594,204.0 | 52,183,889,950.0 | 94.9 | 146.7 | 151.0 | 151.0 | 18.2 | 20,539,493.0 | 0.0 | 20,328,521.0 | 0.0 | 53,916,210,245.0 | 98.1 | 357,060,995.0 | 98.1 | 51,755,992,980.0 | 99.2 | 407,568,449.0 | 0.8 | 33,291,105,544.0 | 61.7 | 222,935,401.0 | 62.4 | 50,185,049,414.0 | 96.2 | 1,132,750,333.0 | 2.1 | 25,008,176.0 | 7.0 | 1,043,523,703.0 | 1.9 | 6,910,753.0 | 1.9 | 1,436,733.0 | 0.4 | 54,959,733,948.0 | 363,971,748.0 | 2,322,480,717.0 | 2.2 | 60,054,281.0 | 8.4 | 355,624,262.0 | 726,565,952.0 | 344,926,568.0 | 94.8 | 726,565,952.0 | 100.0 | 1,984,037,169.0 | 1.8 | 13,139,319.0 | 1.8 | 4,859,153.0 | 1.3 | 706,862,853.0 | 97.3 | 640,919,629.0 | 65,943,224.0 | 9.1 | 2,927,375,408.0 | 2,768,280,142.0 | 9,843,522.0 | 915,925.0 | 0.0 | 0.3 | 89.3 | 2,550,628,082.0 | 82.3 | 94.4 | 2,264,736,153.0 | 73.1 | 1,566,524,977.0 | 50.5 | 777,583,130.0 | 25.1 | 232,935,028.0 | 1,454,363.0 | 0.0 | 7.5 | 53,170,441.0 | 1.7 | 21,612,326.0 | 0.7 | 30.5 | 30.0 | 166.1 | 706,862,853.0 | 0.0 | 0.0 | 706,862,853.0 | 703,441,840.0 | 726,565,952.0 | 109,711,458,752.0 | 726,565,952.0 |
| RIH0_ANA0-HG006-19_sent | sent | 104,361,659,269.0 | 95.1 | 146.8 | 151.0 | 151.0 | 17.3 | 3.0 | 45,066,381.0 | 0.0 | 9,926,152,610.0 | 9.3 | 65,736,110.0 | 9.3 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG006-19/align/sent/RIH0_ANA0-HG006-19.sent.mrkdup.sort.bam | 45,374,474,243.0 | 414.3 | 390.0 | 301.0 | 164.5 | 39,514,477.0 | 0.0 | 107,738,691,921.0 | 98.2 | 713,501,271.0 | 98.2 | 103,651,948,600.0 | 99.3 | 670,196,192.0 | 0.6 | 70,676,511,439.0 | 65.6 | 473,727,908.0 | 66.4 | 101,209,356,793.0 | 97.0 | 52,207,000,514.0 | 95.3 | 146.9 | 151.0 | 151.0 | 16.1 | 23,961,837.0 | 0.0 | 20,019,017.0 | 0.0 | 53,818,046,202.0 | 98.2 | 356,410,902.0 | 98.2 | 51,920,928,118.0 | 99.5 | 266,053,379.0 | 0.5 | 37,362,110,728.0 | 69.4 | 250,594,736.0 | 70.3 | 51,047,083,263.0 | 97.8 | 1,194,407,998.0 | 2.2 | 35,239,604.0 | 9.9 | 958,755,474.0 | 1.8 | 6,349,374.0 | 1.8 | 2,138,497.0 | 0.6 | 54,776,801,676.0 | 362,760,276.0 | 52,154,658,755.0 | 94.9 | 146.7 | 151.0 | 151.0 | 18.4 | 21,104,544.0 | 0.0 | 19,495,460.0 | 0.0 | 53,920,645,719.0 | 98.1 | 357,090,369.0 | 98.1 | 51,731,020,482.0 | 99.2 | 404,142,813.0 | 0.8 | 33,314,400,711.0 | 61.8 | 223,133,172.0 | 62.5 | 50,162,273,530.0 | 96.2 | 1,140,959,157.0 | 2.1 | 25,315,498.0 | 7.1 | 1,064,546,074.0 | 1.9 | 7,049,974.0 | 1.9 | 1,513,497.0 | 0.4 | 54,985,191,793.0 | 364,140,343.0 | 2,335,367,155.0 | 2.2 | 60,555,102.0 | 8.5 | 355,576,872.0 | 726,900,619.0 | 344,830,002.0 | 94.7 | 726,900,619.0 | 100.0 | 2,023,301,548.0 | 1.8 | 13,399,348.0 | 1.8 | 4,911,477.0 | 1.3 | 706,602,824.0 | 97.2 | 640,866,714.0 | 65,736,110.0 | 9.0 | 2,927,582,144.0 | 2,768,403,896.0 | 10,159,441.0 | 902,874.0 | 0.0 | 0.3 | 89.3 | 2,550,561,311.0 | 82.3 | 94.4 | 2,264,433,363.0 | 73.0 | 1,565,849,786.0 | 50.5 | 776,857,868.0 | 25.1 | 232,742,480.0 | 1,444,263.0 | 0.0 | 7.5 | 53,477,731.0 | 1.7 | 22,061,042.0 | 0.7 | 30.5 | 30.0 | 161.5 | 706,602,824.0 | 0.0 | 0.0 | 706,602,824.0 | 703,026,430.0 | 726,900,619.0 | 109,761,993,469.0 | 726,900,619.0 |
| RIH0_ANA0-HG006-19_strobe | strobe | 103,469,738,642.0 | 94.9 | 114.5 | 151.0 | 151.0 | 66.7 | 3.3 | 83,469,738.0 | 0.1 | 9,763,967,436.0 | 9.3 | 64,662,036.0 | 9.3 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG006-19/align/strobe/RIH0_ANA0-HG006-19.strobe.mrkdup.sort.bam | 42,563,015,539.0 | 416.8 | 392.0 | 306.0 | 163.6 | 76,039,278.0 | 0.1 | 105,293,497,430.0 | 96.5 | 887,659,619.0 | 97.3 | 102,763,894,995.0 | 99.3 | 629,804,369.0 | 0.6 | 70,661,799,573.0 | 67.1 | 472,637,577.0 | 53.2 | 100,503,342,227.0 | 97.1 | 51,847,916,484.0 | 95.3 | 114.4 | 151.0 | 151.0 | 66.4 | 44,406,336.0 | 0.1 | 37,780,912.0 | 0.1 | 52,797,264,156.0 | 97.0 | 445,604,260.0 | 97.6 | 51,555,697,624.0 | 99.4 | 254,437,948.0 | 0.5 | 37,362,556,841.0 | 70.8 | 250,135,221.0 | 56.1 | 50,752,566,524.0 | 97.9 | 949,347,672.0 | 1.8 | 31,851,600.0 | 7.1 | 1,622,788,997.0 | 3.0 | 10,746,947.0 | 2.4 | 4,931,509.0 | 1.1 | 54,420,053,153.0 | 456,351,207.0 | 51,621,822,158.0 | 94.5 | 114.7 | 151.0 | 151.0 | 67.0 | 39,063,402.0 | 0.1 | 38,258,366.0 | 0.1 | 52,496,233,274.0 | 96.1 | 442,055,359.0 | 96.9 | 51,208,197,371.0 | 99.2 | 375,366,421.0 | 0.7 | 33,299,242,732.0 | 63.4 | 222,502,356.0 | 50.3 | 49,750,775,703.0 | 96.4 | 874,411,116.0 | 1.7 | 21,290,734.0 | 4.8 | 2,158,673,048.0 | 3.9 | 14,295,848.0 | 3.1 | 1,382,608.0 | 0.3 | 54,654,906,322.0 | 456,351,207.0 | 1,823,758,788.0 | 1.7 | 53,142,334.0 | 6.0 | 440,672,751.0 | 912,702,414.0 | 426,496,191.0 | 93.5 | 912,702,414.0 | 100.0 | 3,781,462,045.0 | 3.5 | 25,042,795.0 | 2.7 | 9,364,339.0 | 2.1 | 697,307,930.0 | 76.4 | 632,645,894.0 | 64,662,036.0 | 7.1 | 2,927,550,000.0 | 2,764,202,044.0 | 10,130,105.0 | 904,504.0 | 0.0 | 0.3 | 89.2 | 2,542,770,504.0 | 82.0 | 94.4 | 2,253,016,207.0 | 72.7 | 1,547,234,555.0 | 49.9 | 756,575,598.0 | 24.4 | 221,782,870.0 | 1,462,856.0 | 0.0 | 7.2 | 50,319,237.0 | 1.6 | 21,163,435.0 | 0.7 | 30.3 | 29.0 | 130.2 | 697,307,930.0 | 0.0 | 0.0 | 697,307,930.0 | 694,021,088.0 | 912,702,414.0 | 109,074,959,475.0 | 912,702,414.0 |
| RIH0_ANA0-HG007-19_bwa2a | bwa2a | 106,303,433,554.0 | 96.0 | 147.3 | 151.0 | 151.0 | 16.4 | 2.8 | 41,454,683.0 | 0.0 | 9,931,095,444.0 | 9.2 | 65,768,844.0 | 9.2 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG007-19/align/bwa2a/RIH0_ANA0-HG007-19.bwa2a.mrkdup.sort.bam | 44,355,600,372.0 | 423.6 | 400.0 | 320.0 | 166.3 | 38,163,268.0 | 0.0 | 109,329,834,338.0 | 98.7 | 724,038,638.0 | 98.7 | 105,604,415,220.0 | 99.3 | 660,855,066.0 | 0.6 | 72,246,040,406.0 | 66.1 | 483,577,115.0 | 66.8 | 103,045,417,699.0 | 96.9 | 53,259,782,622.0 | 96.3 | 147.6 | 151.0 | 151.0 | 14.9 | 21,758,080.0 | 0.0 | 19,166,151.0 | 0.0 | 54,629,451,044.0 | 98.8 | 361,784,444.0 | 98.8 | 52,984,082,732.0 | 99.5 | 256,533,739.0 | 0.5 | 38,383,280,480.0 | 70.3 | 256,907,296.0 | 71.0 | 52,081,493,768.0 | 97.8 | 1,018,598,254.0 | 1.9 | 29,578,733.0 | 8.2 | 651,568,171.0 | 1.2 | 4,315,021.0 | 1.2 | 1,965,541.0 | 0.5 | 55,281,019,215.0 | 366,099,465.0 | 53,043,650,932.0 | 95.6 | 147.0 | 151.0 | 151.0 | 17.8 | 19,696,603.0 | 0.0 | 18,997,117.0 | 0.0 | 54,700,383,294.0 | 98.6 | 362,254,194.0 | 98.6 | 52,620,332,488.0 | 99.2 | 404,321,327.0 | 0.8 | 33,862,759,926.0 | 61.9 | 226,669,819.0 | 62.6 | 50,963,923,931.0 | 96.1 | 1,088,980,818.0 | 2.0 | 23,944,068.0 | 6.6 | 797,317,297.0 | 1.4 | 5,280,247.0 | 1.4 | 1,057,196.0 | 0.3 | 55,497,700,591.0 | 367,534,441.0 | 2,107,579,072.0 | 1.9 | 53,522,801.0 | 7.4 | 361,196,998.0 | 733,633,906.0 | 351,073,817.0 | 95.5 | 733,633,906.0 | 100.0 | 1,448,885,468.0 | 1.3 | 9,595,268.0 | 1.3 | 3,314,706.0 | 0.9 | 717,953,726.0 | 97.9 | 652,184,882.0 | 65,768,844.0 | 9.0 | 2,908,121,090.0 | 2,822,075,009.0 | 10,761,045.0 | 819,513.0 | 0.0 | 0.3 | 91.0 | 2,686,716,588.0 | 86.7 | 93.8 | 2,462,753,591.0 | 79.4 | 1,682,510,445.0 | 54.3 | 661,453,552.0 | 21.3 | 133,776,513.0 | 1,431,041.0 | 0.0 | 4.3 | 33,295,476.0 | 1.1 | 20,230,946.0 | 0.7 | 31.1 | 31.0 | 182.4 | 717,953,726.0 | 0.0 | 0.0 | 717,953,726.0 | 714,987,870.0 | 733,633,906.0 | 110,778,719,806.0 | 733,633,906.0 |
| RIH0_ANA0-HG007-19_sent | sent | 106,259,431,352.0 | 95.9 | 147.2 | 151.0 | 151.0 | 16.6 | 2.8 | 42,391,450.0 | 0.0 | 9,911,085,830.0 | 9.1 | 65,636,330.0 | 9.1 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG007-19/align/sent/RIH0_ANA0-HG007-19.sent.mrkdup.sort.bam | 45,291,023,131.0 | 423.6 | 400.0 | 320.0 | 166.6 | 36,945,580.0 | 0.0 | 109,339,929,896.0 | 98.7 | 724,105,496.0 | 98.7 | 105,566,424,728.0 | 99.3 | 656,061,044.0 | 0.6 | 72,292,085,848.0 | 66.1 | 483,940,449.0 | 66.8 | 103,009,927,296.0 | 96.9 | 53,240,860,855.0 | 96.3 | 147.5 | 151.0 | 151.0 | 15.0 | 22,245,864.0 | 0.0 | 18,570,359.0 | 0.0 | 54,635,383,532.0 | 98.8 | 361,823,732.0 | 98.8 | 52,967,740,217.0 | 99.5 | 254,550,279.0 | 0.5 | 38,403,978,229.0 | 70.3 | 257,044,483.0 | 71.0 | 52,065,295,829.0 | 97.8 | 1,023,818,281.0 | 1.9 | 29,805,225.0 | 8.2 | 665,269,911.0 | 1.2 | 4,405,761.0 | 1.2 | 2,052,126.0 | 0.6 | 55,300,653,443.0 | 366,229,493.0 | 53,018,570,497.0 | 95.5 | 146.9 | 151.0 | 151.0 | 18.0 | 20,145,586.0 | 0.0 | 18,375,221.0 | 0.0 | 54,704,546,364.0 | 98.5 | 362,281,764.0 | 98.5 | 52,598,684,511.0 | 99.2 | 401,510,765.0 | 0.8 | 33,888,107,619.0 | 61.9 | 226,895,966.0 | 62.6 | 50,944,631,467.0 | 96.1 | 1,094,961,716.0 | 2.0 | 24,258,705.0 | 6.7 | 816,416,834.0 | 1.5 | 5,406,734.0 | 1.5 | 1,114,056.0 | 0.3 | 55,520,963,198.0 | 367,688,498.0 | 2,118,779,997.0 | 1.9 | 54,063,930.0 | 7.5 | 361,167,708.0 | 733,917,991.0 | 351,000,508.0 | 95.5 | 733,917,991.0 | 100.0 | 1,481,686,745.0 | 1.3 | 9,812,495.0 | 1.3 | 3,354,608.0 | 0.9 | 717,736,499.0 | 97.8 | 652,100,169.0 | 65,636,330.0 | 8.9 | 2,908,358,685.0 | 2,822,323,870.0 | 10,929,863.0 | 808,256.0 | 0.0 | 0.4 | 91.0 | 2,686,815,647.0 | 86.7 | 93.8 | 2,462,592,986.0 | 79.4 | 1,681,849,766.0 | 54.3 | 660,979,171.0 | 21.3 | 133,902,999.0 | 1,417,115.0 | 0.0 | 4.3 | 33,684,523.0 | 1.1 | 20,619,908.0 | 0.7 | 31.1 | 31.0 | 178.4 | 717,736,499.0 | 0.0 | 0.0 | 717,736,499.0 | 714,633,220.0 | 733,917,991.0 | 110,821,616,641.0 | 733,917,991.0 |
| RIH0_ANA0-HG007-19_strobe | strobe | 105,530,554,964.0 | 95.7 | 115.7 | 151.0 | 151.0 | 65.8 | 3.2 | 77,723,890.0 | 0.1 | 9,801,726,043.0 | 9.1 | 64,912,093.0 | 9.1 | 0.0 | 0.0 | results/day/hg38/RIH0_ANA0-HG007-19/align/strobe/RIH0_ANA0-HG007-19.strobe.mrkdup.sort.bam | 42,589,314,730.0 | 426.0 | 401.0 | 320.0 | 165.9 | 69,061,326.0 | 0.1 | 107,221,293,139.0 | 97.3 | 897,657,508.0 | 97.8 | 104,837,138,143.0 | 99.3 | 624,355,495.0 | 0.6 | 72,269,607,154.0 | 67.4 | 482,926,011.0 | 53.8 | 102,437,713,941.0 | 97.1 | 52,947,198,799.0 | 96.3 | 115.7 | 151.0 | 151.0 | 65.5 | 40,019,479.0 | 0.1 | 33,406,369.0 | 0.1 | 53,774,867,148.0 | 97.8 | 450,631,862.0 | 98.2 | 52,668,516,246.0 | 99.5 | 245,276,184.0 | 0.5 | 38,402,677,545.0 | 71.4 | 256,650,146.0 | 57.0 | 51,827,605,341.0 | 97.9 | 827,668,349.0 | 1.5 | 27,139,230.0 | 6.0 | 1,227,158,729.0 | 2.2 | 8,126,879.0 | 1.8 | 4,744,343.0 | 1.0 | 55,002,025,877.0 | 458,758,741.0 | 52,583,356,165.0 | 95.2 | 115.7 | 151.0 | 151.0 | 66.1 | 37,704,411.0 | 0.1 | 35,654,957.0 | 0.1 | 53,446,425,991.0 | 96.8 | 447,025,646.0 | 97.4 | 52,168,621,897.0 | 99.2 | 379,079,311.0 | 0.7 | 33,866,929,609.0 | 63.4 | 226,275,865.0 | 50.6 | 50,610,108,600.0 | 96.2 | 863,069,826.0 | 1.6 | 20,731,853.0 | 4.6 | 1,771,697,345.0 | 3.2 | 11,733,095.0 | 2.6 | 1,138,127.0 | 0.2 | 55,218,123,336.0 | 458,758,741.0 | 1,690,738,175.0 | 1.6 | 47,871,083.0 | 5.3 | 445,887,519.0 | 917,517,482.0 | 432,488,915.0 | 94.3 | 917,517,482.0 | 100.0 | 2,998,856,074.0 | 2.7 | 19,859,974.0 | 2.2 | 6,988,752.0 | 1.5 | 710,074,789.0 | 77.4 | 645,162,696.0 | 64,912,093.0 | 7.1 | 2,908,511,794.0 | 2,820,046,153.0 | 10,611,976.0 | 817,434.0 | 0.0 | 0.3 | 91.0 | 2,681,689,422.0 | 86.5 | 93.8 | 2,453,506,168.0 | 79.1 | 1,662,118,630.0 | 53.6 | 641,751,498.0 | 20.7 | 127,109,482.0 | 1,443,225.0 | 0.0 | 4.1 | 31,848,520.0 | 1.0 | 19,664,651.0 | 0.6 | 30.9 | 31.0 | 158.5 | 710,074,789.0 | 0.0 | 0.0 | 710,074,789.0 | 706,865,062.0 | 917,517,482.0 | 110,220,149,213.0 | 917,517,482.0 |
Controls Concordance Report
Concordance Stats For The GIAB HC Regions For This Sample.
Showing 0/675 rows and 19/19 columns.
| mqc_id | SNPClass | Sample | TgtRegionSize | TN | FN | TP | FP | Fscore | Sensitivity-Recall | Specificity | FDR | PPV | Precision | AltId | CmpFootprint | AllVarMeanDP | CovBin | Aligner | SNVCaller |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,714.0 | 23,249.0 | 3,808,139.0 | 11,748.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,440.0 | 1,291.0 | 241,371.0 | 515.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,506.0 | 2,078.0 | 226,518.0 | 492.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,696.0 | 77.0 | 32,329.0 | 26.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,644.0 | 16.0 | 442.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,083.0 | 12,733.0 | 2,242,286.0 | 6,843.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-clair3-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,458,856.0 | 7,053.0 | 1,065,193.0 | 3,872.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,643.0 | 22,085.0 | 3,809,374.0 | 4,121.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,253.0 | 850.0 | 241,999.0 | 217.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep | |||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,248.0 | 1,419.0 | 227,435.0 | 202.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,864.0 | 52.0 | 32,186.0 | 52.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,647.0 | 13.0 | 442.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,148.0 | 12,834.0 | 2,242,120.0 | 2,286.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-deep-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,458,994.0 | 6,916.0 | 1,065,192.0 | 1,364.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,033.0 | 551,569.0 | 3,280,500.0 | 31,934.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,563.0 | 242,539.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,528.0 | 228,574.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,499,469.0 | 31,633.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,639.0 | 463.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,275,435.0 | 29,688.0 | 2,225,979.0 | 17,245.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,457,910.0 | 18,671.0 | 1,054,521.0 | 14,689.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,690,033.0 | 23,261.0 | 3,817,808.0 | 40,569.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,275,901.0 | 918.0 | 254,283.0 | 11,959.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,277,667.0 | 1,311.0 | 252,124.0 | 1,499.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,100.0 | 0.0 | 2.0 | 3.0 | 0.6 | 1.0 | 1.0 | 0.6 | 0.4 | 0.4 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,507,811.0 | 22.0 | 23,269.0 | 11,242.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,048.0 | 4.0 | 50.0 | 115.0 | 0.5 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,280,987.0 | 13,520.0 | 2,236,595.0 | 9,465.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-oct-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,472,132.0 | 7,486.0 | 1,051,484.0 | 6,286.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,700,449.0 | 20,704.0 | 3,809,949.0 | 6,503.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,060.0 | 942.0 | 242,100.0 | 273.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | ||
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,232.0 | 939.0 | 227,931.0 | 270.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,865.0 | 65.0 | 32,172.0 | 13.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,634.0 | 3.0 | 465.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,563.0 | 12,101.0 | 2,242,438.0 | 3,760.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-bwa2a-sentd-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,459,606.0 | 6,653.0 | 1,064,843.0 | 2,184.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,727.0 | 22,295.0 | 3,809,080.0 | 13,004.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,444.0 | 1,283.0 | 241,375.0 | 531.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,512.0 | 2,051.0 | 226,539.0 | 522.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,695.0 | 78.0 | 32,329.0 | 23.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,642.0 | 18.0 | 442.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,082.0 | 12,177.0 | 2,242,843.0 | 7,612.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-clair3-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,458,863.0 | 6,687.0 | 1,065,552.0 | 4,316.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,645.0 | 21,008.0 | 3,810,449.0 | 4,411.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,259.0 | 827.0 | 242,016.0 | 218.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep | |||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,250.0 | 1,367.0 | 227,485.0 | 201.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,863.0 | 52.0 | 32,187.0 | 50.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,646.0 | 13.0 | 443.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,146.0 | 12,224.0 | 2,242,732.0 | 2,447.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-deep-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,458,992.0 | 6,524.0 | 1,065,586.0 | 1,495.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,032.0 | 550,274.0 | 3,281,796.0 | 32,775.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,563.0 | 242,539.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,528.0 | 228,574.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,499,470.0 | 31,632.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,639.0 | 463.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,275,434.0 | 28,936.0 | 2,226,732.0 | 17,699.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,457,909.0 | 18,129.0 | 1,055,064.0 | 15,076.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,690,075.0 | 22,338.0 | 3,818,689.0 | 41,363.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,275,909.0 | 898.0 | 254,295.0 | 11,977.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct | |||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,277,683.0 | 1,272.0 | 252,147.0 | 1,509.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 0.0 | 1.0 | 5.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,507,822.0 | 24.0 | 23,256.0 | 11,242.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,049.0 | 4.0 | 49.0 | 116.0 | 0.4 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,280,982.0 | 13,009.0 | 2,237,111.0 | 9,933.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-oct-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,472,141.0 | 7,131.0 | 1,051,830.0 | 6,581.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,700,455.0 | 19,493.0 | 3,811,154.0 | 7,000.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,062.0 | 913.0 | 242,127.0 | 273.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd | |||||
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,232.0 | 921.0 | 227,949.0 | 275.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 0.0 | 1.0 | 3.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,863.0 | 61.0 | 32,178.0 | 12.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,634.0 | 3.0 | 465.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,566.0 | 11,414.0 | 2,243,122.0 | 4,037.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-sent-sentd-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,459,609.0 | 6,181.0 | 1,065,312.0 | 2,400.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,795.0 | 36,208.0 | 3,795,099.0 | 11,193.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,492.0 | 1,727.0 | 240,883.0 | 570.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,512.0 | 2,402.0 | 226,188.0 | 556.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,783.0 | 88.0 | 32,231.0 | 42.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,649.0 | 11.0 | 442.0 | 3.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,055.0 | 20,353.0 | 2,234,694.0 | 6,396.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-clair3-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,458,815.0 | 11,626.0 | 1,060,661.0 | 3,626.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,699,663.0 | 32,368.0 | 3,799,071.0 | 3,529.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,219.0 | 1,108.0 | 241,775.0 | 193.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep | ||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,226.0 | 1,598.0 | 227,278.0 | 178.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,884.0 | 50.0 | 32,168.0 | 53.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,648.0 | 9.0 | 445.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,195.0 | 19,165.0 | 2,235,742.0 | 1,913.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-deep-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,459,002.0 | 10,437.0 | 1,061,663.0 | 1,191.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,698,589.0 | 568,413.0 | 3,264,100.0 | 19,356.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,712.0 | 242,390.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | |||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,667.0 | 228,435.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,499,461.0 | 31,641.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,639.0 | 463.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,275,180.0 | 40,773.0 | 2,215,149.0 | 9,335.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,457,441.0 | 24,710.0 | 1,048,951.0 | 10,021.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,690,232.0 | 33,262.0 | 3,807,608.0 | 38,105.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,276,013.0 | 1,142.0 | 253,947.0 | 11,827.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,277,758.0 | 1,457.0 | 251,887.0 | 1,420.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,100.0 | 0.0 | 2.0 | 7.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,507,827.0 | 22.0 | 23,253.0 | 11,240.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,045.0 | 4.0 | 53.0 | 114.0 | 0.5 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,281,009.0 | 19,794.0 | 2,230,299.0 | 8,094.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-oct-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,472,093.0 | 10,843.0 | 1,048,166.0 | 5,403.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-All | All | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,524,700,428.0 | 27,398.0 | 3,803,276.0 | 5,355.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,288,054.0 | 1,059.0 | 241,989.0 | 243.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,102.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd | |||||
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-INS_50 | INS_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,302,223.0 | 1,099.0 | 227,780.0 | 246.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,531,101.0 | 0.0 | 1.0 | 2.0 | 0.5 | 1.0 | 1.0 | 0.7 | 0.3 | 0.3 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,498,895.0 | 67.0 | 32,140.0 | 13.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,528,530,634.0 | 4.0 | 464.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-SNPts | SNPts | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,526,276,555.0 | 16,307.0 | 2,238,240.0 | 3,071.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG003-19_DBC0_0-strobe-sentd-SNPtv | SNPtv | RIH0_ANA0-HG003-19_DBC0_0 | 2,528,531,102.0 | 2,527,459,578.0 | 8,862.0 | 1,062,662.0 | 1,779.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG003 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,952.0 | 23,396.0 | 3,833,183.0 | 9,531.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,104.0 | 1,221.0 | 244,206.0 | 358.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,702.0 | 2,106.0 | 228,723.0 | 389.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,065.0 | 103.0 | 33,363.0 | 9.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,096.0 | 6.0 | 429.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,193.0 | 13,104.0 | 2,254,234.0 | 5,703.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-clair3-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,447.0 | 6,856.0 | 1,072,228.0 | 3,071.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,917.0 | 23,185.0 | 3,833,429.0 | 3,453.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,870.0 | 905.0 | 244,756.0 | 198.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,463.0 | 1,490.0 | 229,578.0 | 188.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 5.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep | ||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,295.0 | 35.0 | 33,201.0 | 30.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,099.0 | 5.0 | 427.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,283.0 | 13,687.0 | 2,253,561.0 | 1,954.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-deep-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,562.0 | 7,063.0 | 1,071,906.0 | 1,078.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,322.0 | 559,288.0 | 3,297,921.0 | 32,770.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,235.0 | 245,296.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,750.0 | 230,781.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,802.0 | 32,729.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,096.0 | 435.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,219,597.0 | 31,050.0 | 2,236,884.0 | 17,376.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,407,497.0 | 18,997.0 | 1,061,037.0 | 15,394.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,621,592.0 | 24,399.0 | 3,841,540.0 | 40,669.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,229,644.0 | 958.0 | 256,929.0 | 12,227.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,231,572.0 | 1,333.0 | 254,626.0 | 1,471.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 5.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct | ||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,463,536.0 | 20.0 | 23,975.0 | 11,734.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,481.0 | 0.0 | 50.0 | 111.0 | 0.5 | 1.0 | 1.0 | 0.7 | 0.3 | 0.3 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,225,191.0 | 14,445.0 | 2,247,895.0 | 9,141.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-oct-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,421,823.0 | 7,643.0 | 1,058,065.0 | 5,980.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,631,750.0 | 21,769.0 | 3,834,012.0 | 6,476.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,730.0 | 959.0 | 244,842.0 | 270.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,427.0 | 985.0 | 230,119.0 | 262.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,233.0 | 68.0 | 33,230.0 | 4.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,094.0 | 0.0 | 437.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,688.0 | 12,961.0 | 2,253,882.0 | 3,784.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-bwa2a-sentd-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,409,233.0 | 6,796.0 | 1,071,502.0 | 2,156.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,965.0 | 22,847.0 | 3,833,719.0 | 11,121.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,149.0 | 1,207.0 | 244,175.0 | 398.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,744.0 | 2,063.0 | 228,724.0 | 444.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,103.0 | 100.0 | 33,328.0 | 8.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,097.0 | 6.0 | 428.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,151.0 | 12,795.0 | 2,254,585.0 | 6,691.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-clair3-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,376.0 | 6,676.0 | 1,072,479.0 | 3,579.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,914.0 | 22,048.0 | 3,834,569.0 | 3,732.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,869.0 | 875.0 | 244,787.0 | 216.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,468.0 | 1,442.0 | 229,621.0 | 187.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 5.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep | ||
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,294.0 | 36.0 | 33,201.0 | 31.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,099.0 | 5.0 | 427.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,278.0 | 13,046.0 | 2,254,207.0 | 2,130.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-deep-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,561.0 | 6,644.0 | 1,072,326.0 | 1,163.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,313.0 | 558,028.0 | 3,299,190.0 | 33,598.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,236.0 | 245,295.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,751.0 | 230,780.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,802.0 | 32,729.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,096.0 | 435.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,219,592.0 | 30,279.0 | 2,237,660.0 | 17,873.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,407,491.0 | 18,510.0 | 1,061,530.0 | 15,725.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,621,591.0 | 23,521.0 | 3,842,419.0 | 41,588.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,229,631.0 | 936.0 | 256,964.0 | 12,263.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,231,563.0 | 1,305.0 | 254,663.0 | 1,499.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct | ||
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,463,539.0 | 19.0 | 23,973.0 | 11,733.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,479.0 | 1.0 | 51.0 | 111.0 | 0.5 | 1.0 | 1.0 | 0.7 | 0.3 | 0.3 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,225,196.0 | 13,950.0 | 2,248,385.0 | 9,683.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-oct-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,421,838.0 | 7,310.0 | 1,058,383.0 | 6,298.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,631,765.0 | 20,760.0 | 3,835,006.0 | 6,908.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,732.0 | 929.0 | 244,870.0 | 277.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,424.0 | 953.0 | 230,154.0 | 264.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,233.0 | 63.0 | 33,235.0 | 4.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,094.0 | 0.0 | 437.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,695.0 | 12,423.0 | 2,254,413.0 | 4,049.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-sent-sentd-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,409,242.0 | 6,392.0 | 1,071,897.0 | 2,314.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,987.0 | 36,977.0 | 3,819,567.0 | 10,330.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,068.0 | 1,589.0 | 243,874.0 | 475.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,721.0 | 2,379.0 | 228,431.0 | 429.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,051.0 | 107.0 | 33,373.0 | 14.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,096.0 | 2.0 | 433.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,213.0 | 21,377.0 | 2,245,941.0 | 6,089.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-clair3-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,493.0 | 11,523.0 | 1,067,515.0 | 3,323.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,630,942.0 | 33,800.0 | 3,822,789.0 | 3,272.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,848.0 | 1,175.0 | 244,508.0 | 186.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,460.0 | 1,667.0 | 229,404.0 | 201.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep | ||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,287.0 | 40.0 | 33,204.0 | 29.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,099.0 | 1.0 | 431.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,296.0 | 20,326.0 | 2,246,909.0 | 1,814.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-deep-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,408,607.0 | 10,591.0 | 1,068,333.0 | 1,039.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,629,914.0 | 575,908.0 | 3,281,709.0 | 19,950.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,242,363.0 | 245,168.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,878.0 | 230,653.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,803.0 | 32,728.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,096.0 | 435.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,219,339.0 | 41,949.0 | 2,226,243.0 | 9,457.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,407,090.0 | 24,975.0 | 1,055,466.0 | 10,493.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,621,789.0 | 34,825.0 | 3,830,917.0 | 38,561.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,229,728.0 | 1,190.0 | 256,613.0 | 12,135.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,231,660.0 | 1,483.0 | 254,388.0 | 1,514.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 4.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct | ||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,463,555.0 | 20.0 | 23,956.0 | 11,722.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,476.0 | 0.0 | 55.0 | 112.0 | 0.5 | 1.0 | 1.0 | 0.7 | 0.3 | 0.3 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,225,183.0 | 21,047.0 | 2,241,301.0 | 7,804.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-oct-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,421,842.0 | 11,085.0 | 1,054,604.0 | 5,270.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-All | All | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,520,631,701.0 | 28,802.0 | 3,827,028.0 | 5,255.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,241,729.0 | 1,121.0 | 244,681.0 | 246.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-INS_50 | INS_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,256,420.0 | 1,154.0 | 229,957.0 | 263.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,531.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd | |||||
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,454,272.0 | 69.0 | 33,190.0 | 4.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,524,487,095.0 | 1.0 | 435.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-SNPts | SNPts | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,522,220,649.0 | 17,337.0 | 2,249,545.0 | 3,025.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG004-19_DBC0_0-strobe-sentd-SNPtv | SNPtv | RIH0_ANA0-HG004-19_DBC0_0 | 2,524,487,531.0 | 2,523,409,191.0 | 9,120.0 | 1,069,220.0 | 1,717.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG004 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,057.0 | 23,385.0 | 3,668,369.0 | 11,182.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,194.0 | 1,038.0 | 201,579.0 | 474.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,817.0 | 1,853.0 | 191,141.0 | 445.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,319.0 | 46.0 | 20,446.0 | 56.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,472.0 | 8.0 | 331.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,926.0 | 13,194.0 | 2,208,691.0 | 6,612.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-clair3-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,384.0 | 7,246.0 | 1,046,181.0 | 3,594.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,051.0 | 22,411.0 | 3,669,349.0 | 3,102.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,074.0 | 749.0 | 201,988.0 | 161.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,607.0 | 1,352.0 | 191,852.0 | 143.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep | ||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,450.0 | 15.0 | 20,346.0 | 51.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,478.0 | 7.0 | 326.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,989.0 | 13,276.0 | 2,208,546.0 | 1,780.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-deep-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,508.0 | 7,012.0 | 1,046,291.0 | 964.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,036,407.0 | 463,517.0 | 3,228,887.0 | 29,643.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,355.0 | 202,456.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,792.0 | 193,019.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,897.0 | 19,914.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,465.0 | 346.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,381.0 | 29,900.0 | 2,192,530.0 | 15,808.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,674,572.0 | 17,882.0 | 1,036,357.0 | 13,835.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,029,933.0 | 23,573.0 | 3,675,305.0 | 31,023.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,516,625.0 | 784.0 | 211,402.0 | 7,766.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,518,349.0 | 1,224.0 | 209,238.0 | 1,158.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 4.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct | ||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,713,580.0 | 12.0 | 15,219.0 | 7,248.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,768.0 | 2.0 | 41.0 | 71.0 | 0.5 | 1.0 | 1.0 | 0.6 | 0.4 | 0.4 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,510,737.0 | 13,982.0 | 2,204,092.0 | 9,078.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-oct-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,685,929.0 | 7,569.0 | 1,035,313.0 | 5,698.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,739.0 | 20,743.0 | 3,670,329.0 | 5,916.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,042.0 | 703.0 | 202,066.0 | 232.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | ||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,563.0 | 863.0 | 192,385.0 | 223.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd | |||||
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,266.0 | 17.0 | 20,528.0 | 47.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,469.0 | 2.0 | 340.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,507,384.0 | 12,459.0 | 2,208,968.0 | 3,476.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-bwa2a-sentd-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,676,070.0 | 6,699.0 | 1,046,042.0 | 1,936.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,079.0 | 22,932.0 | 3,668,800.0 | 12,670.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,247.0 | 1,056.0 | 201,508.0 | 523.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,844.0 | 1,874.0 | 191,093.0 | 482.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,323.0 | 51.0 | 20,437.0 | 56.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,475.0 | 9.0 | 327.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,895.0 | 12,974.0 | 2,208,942.0 | 7,548.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-clair3-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,350.0 | 6,968.0 | 1,046,493.0 | 4,060.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,055.0 | 21,323.0 | 3,670,433.0 | 3,383.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,069.0 | 735.0 | 202,007.0 | 167.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,604.0 | 1,314.0 | 191,893.0 | 149.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 3.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep | ||
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,454.0 | 13.0 | 20,344.0 | 50.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,477.0 | 7.0 | 327.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,995.0 | 12,679.0 | 2,209,137.0 | 1,946.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-deep-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,511.0 | 6,575.0 | 1,046,725.0 | 1,067.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,036,406.0 | 462,145.0 | 3,230,260.0 | 30,625.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,356.0 | 202,455.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,793.0 | 193,018.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,897.0 | 19,914.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,465.0 | 346.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,380.0 | 29,042.0 | 2,193,389.0 | 16,394.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,674,570.0 | 17,370.0 | 1,036,871.0 | 14,231.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,029,947.0 | 22,671.0 | 3,676,193.0 | 31,662.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,516,638.0 | 770.0 | 211,403.0 | 7,812.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct | |||||
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,518,372.0 | 1,196.0 | 209,243.0 | 1,162.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 3.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct | ||
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,713,570.0 | 12.0 | 15,229.0 | 7,244.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,767.0 | 2.0 | 42.0 | 71.0 | 0.5 | 1.0 | 1.0 | 0.6 | 0.4 | 0.4 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,510,746.0 | 13,510.0 | 2,204,555.0 | 9,426.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-oct-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,685,909.0 | 7,181.0 | 1,035,721.0 | 5,944.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,749.0 | 19,690.0 | 3,671,372.0 | 6,441.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,042.0 | 694.0 | 202,075.0 | 241.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd | ||
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,564.0 | 834.0 | 192,413.0 | 230.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd | ||
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,260.0 | 18.0 | 20,533.0 | 47.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,468.0 | 3.0 | 340.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,507,392.0 | 11,853.0 | 2,209,566.0 | 3,792.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-sent-sentd-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,676,078.0 | 6,288.0 | 1,046,445.0 | 2,128.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,114.0 | 35,730.0 | 3,655,967.0 | 10,849.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,203.0 | 1,320.0 | 201,288.0 | 488.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,806.0 | 2,036.0 | 190,969.0 | 421.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,294.0 | 55.0 | 20,462.0 | 64.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,476.0 | 8.0 | 327.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,975.0 | 20,853.0 | 2,200,983.0 | 6,487.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-clair3-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,415.0 | 11,458.0 | 1,041,938.0 | 3,388.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,077.0 | 33,089.0 | 3,658,645.0 | 2,817.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,057.0 | 1,001.0 | 201,753.0 | 163.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,617.0 | 1,525.0 | 191,669.0 | 122.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep | ||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,436.0 | 15.0 | 20,360.0 | 50.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,477.0 | 6.0 | 328.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,507,015.0 | 19,960.0 | 2,201,836.0 | 1,575.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-deep-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,675,530.0 | 10,582.0 | 1,042,699.0 | 904.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,036,045.0 | 479,691.0 | 3,213,075.0 | 18,118.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,472.0 | 202,339.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,908.0 | 192,903.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,884.0 | 19,927.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,465.0 | 346.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,506,173.0 | 40,570.0 | 2,182,068.0 | 8,568.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,674,198.0 | 23,606.0 | 1,031,007.0 | 9,550.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,030,117.0 | 33,819.0 | 3,664,875.0 | 28,752.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,516,751.0 | 971.0 | 211,089.0 | 7,611.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,518,466.0 | 1,404.0 | 208,941.0 | 1,129.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 7.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct | ||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,713,554.0 | 12.0 | 15,245.0 | 7,248.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,768.0 | 1.0 | 42.0 | 71.0 | 0.5 | 1.0 | 1.0 | 0.6 | 0.4 | 0.4 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,510,758.0 | 20,477.0 | 2,197,576.0 | 7,668.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-oct-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,685,875.0 | 10,954.0 | 1,031,982.0 | 5,018.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-All | All | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,500,037,724.0 | 27,553.0 | 3,663,534.0 | 4,650.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,526,039.0 | 833.0 | 201,939.0 | 220.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd | |||||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-INS_50 | INS_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,535,561.0 | 1,013.0 | 192,237.0 | 208.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,811.0 | 0.0 | 0.0 | 2.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd | ||
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,708,279.0 | 21.0 | 20,511.0 | 46.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,503,728,469.0 | 1.0 | 341.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-SNPts | SNPts | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,501,507,375.0 | 16,700.0 | 2,204,736.0 | 2,661.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG005-19_DBC0_0-strobe-sentd-SNPtv | SNPtv | RIH0_ANA0-HG005-19_DBC0_0 | 2,503,728,811.0 | 2,502,676,056.0 | 8,985.0 | 1,043,770.0 | 1,513.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG005 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,591.0 | 37,149.0 | 3,660,003.0 | 75,921.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,739,005.0 | 3,057.0 | 200,681.0 | 1,950.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,846.0 | 4,153.0 | 197,744.0 | 1,461.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,920,675.0 | 246.0 | 21,822.0 | 22.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,399.0 | 15.0 | 329.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,452.0 | 18,669.0 | 2,199,622.0 | 28,549.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-clair3-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,891,940.0 | 10,998.0 | 1,039,805.0 | 43,939.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,541.0 | 41,838.0 | 3,655,364.0 | 4,597.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,621.0 | 3,505.0 | 200,617.0 | 257.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,464.0 | 4,356.0 | 197,923.0 | 205.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 6.0 | 4.0 | 1.0 | 0.5 | 0.4 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,364.0 | 247.0 | 21,132.0 | 28.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,410.0 | 14.0 | 319.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,450.0 | 21,549.0 | 2,196,744.0 | 2,436.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-deep-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,891,958.0 | 12,161.0 | 1,038,624.0 | 1,669.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,244,727.0 | 606,933.0 | 3,091,083.0 | 29,275.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,739,176.0 | 203,567.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,829.0 | 201,914.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,181.0 | 21,562.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,387.0 | 356.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,723,924.0 | 114,818.0 | 2,104,001.0 | 16,463.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,890,956.0 | 64,705.0 | 987,082.0 | 12,812.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,236,941.0 | 39,036.0 | 3,666,766.0 | 35,142.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,728,426.0 | 2,518.0 | 211,799.0 | 8,892.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 3.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,723,009.0 | 3,214.0 | 216,520.0 | 1,331.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 5.0 | 5.0 | 10.0 | 0.4 | 0.5 | 1.0 | 0.7 | 0.3 | 0.3 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,927,685.0 | 110.0 | 14,948.0 | 7,066.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,710.0 | 7.0 | 26.0 | 78.0 | 0.4 | 0.8 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,727,601.0 | 21,310.0 | 2,193,832.0 | 10,346.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-oct-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,901,236.0 | 11,872.0 | 1,029,635.0 | 7,416.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,246,039.0 | 39,172.0 | 3,657,532.0 | 7,409.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,706.0 | 3,091.0 | 200,946.0 | 388.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 5.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,487.0 | 2,918.0 | 199,338.0 | 431.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 3.0 | 7.0 | 4.0 | 0.7 | 0.7 | 1.0 | 0.4 | 0.6 | 0.6 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,046.0 | 128.0 | 21,569.0 | 14.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,396.0 | 7.0 | 340.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,835.0 | 21,019.0 | 2,196,889.0 | 3,856.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-bwa2a-sentd-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,892,295.0 | 12,006.0 | 1,038,442.0 | 2,711.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,583.0 | 36,192.0 | 3,660,968.0 | 76,855.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,995.0 | 3,043.0 | 200,705.0 | 1,958.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,826.0 | 4,089.0 | 197,828.0 | 1,453.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,920,698.0 | 243.0 | 21,802.0 | 21.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,401.0 | 14.0 | 328.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,447.0 | 18,132.0 | 2,200,164.0 | 29,215.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-clair3-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,891,942.0 | 10,660.0 | 1,040,141.0 | 44,208.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,544.0 | 40,708.0 | 3,656,491.0 | 4,889.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,622.0 | 3,494.0 | 200,627.0 | 266.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,457.0 | 4,315.0 | 197,971.0 | 207.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 6.0 | 4.0 | 1.0 | 0.5 | 0.4 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,367.0 | 248.0 | 21,128.0 | 29.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,410.0 | 14.0 | 319.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,455.0 | 20,911.0 | 2,197,377.0 | 2,603.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-deep-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,891,959.0 | 11,720.0 | 1,039,064.0 | 1,782.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,244,717.0 | 605,601.0 | 3,092,425.0 | 30,261.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,739,176.0 | 203,567.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,829.0 | 201,914.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,181.0 | 21,562.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,387.0 | 356.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,723,924.0 | 113,992.0 | 2,104,827.0 | 17,018.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,890,946.0 | 64,199.0 | 987,598.0 | 13,243.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,236,969.0 | 38,067.0 | 3,667,707.0 | 35,766.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,728,449.0 | 2,506.0 | 211,788.0 | 8,901.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 3.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,723,030.0 | 3,174.0 | 216,539.0 | 1,333.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 5.0 | 5.0 | 7.0 | 0.5 | 0.5 | 1.0 | 0.6 | 0.4 | 0.4 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,927,683.0 | 110.0 | 14,950.0 | 7,068.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,710.0 | 7.0 | 26.0 | 78.0 | 0.4 | 0.8 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,727,592.0 | 20,684.0 | 2,194,467.0 | 10,738.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-oct-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,901,231.0 | 11,581.0 | 1,029,931.0 | 7,638.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,246,048.0 | 38,039.0 | 3,658,656.0 | 7,724.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,700.0 | 3,071.0 | 200,972.0 | 387.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 6.0 | 0.2 | 1.0 | 1.0 | 0.9 | 0.1 | 0.1 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,484.0 | 2,879.0 | 199,380.0 | 429.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 3.0 | 7.0 | 4.0 | 0.7 | 0.7 | 1.0 | 0.4 | 0.6 | 0.6 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,050.0 | 126.0 | 21,567.0 | 14.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,396.0 | 7.0 | 340.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,843.0 | 20,373.0 | 2,197,527.0 | 4,080.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-sent-sentd-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,892,301.0 | 11,580.0 | 1,038,862.0 | 2,804.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,628.0 | 50,860.0 | 3,646,255.0 | 56,091.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,739,014.0 | 3,543.0 | 200,186.0 | 1,844.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,795.0 | 4,343.0 | 197,605.0 | 1,439.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,920,807.0 | 226.0 | 21,710.0 | 31.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,401.0 | 10.0 | 332.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,437.0 | 26,797.0 | 2,191,509.0 | 21,764.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-clair3-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,891,900.0 | 15,930.0 | 1,034,913.0 | 31,012.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,245,596.0 | 53,089.0 | 3,644,058.0 | 4,137.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,583.0 | 3,949.0 | 200,211.0 | 242.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 1.0 | 0.7 | 1.0 | 1.0 | 0.5 | 0.5 | 0.5 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,407.0 | 4,619.0 | 197,717.0 | 189.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 4.0 | 6.0 | 2.0 | 0.7 | 0.6 | 1.0 | 0.2 | 0.8 | 0.8 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,359.0 | 257.0 | 21,127.0 | 27.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,410.0 | 11.0 | 322.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,541.0 | 28,515.0 | 2,189,687.0 | 2,162.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-deep-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,892,022.0 | 15,734.0 | 1,034,987.0 | 1,513.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,244,482.0 | 624,067.0 | 3,074,194.0 | 16,782.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,739,263.0 | 203,480.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,914.0 | 201,829.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 10.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,175.0 | 21,568.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,387.0 | 356.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,723,797.0 | 126,040.0 | 2,092,906.0 | 8,573.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,890,672.0 | 70,783.0 | 981,288.0 | 8,209.0 | 1.0 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,237,124.0 | 50,198.0 | 3,655,421.0 | 32,871.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,728,483.0 | 3,064.0 | 211,196.0 | 8,663.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 4.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,723,104.0 | 3,576.0 | 216,063.0 | 1,275.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 5.0 | 5.0 | 9.0 | 0.4 | 0.5 | 1.0 | 0.6 | 0.4 | 0.4 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,927,677.0 | 120.0 | 14,946.0 | 7,061.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,711.0 | 5.0 | 27.0 | 82.0 | 0.4 | 0.8 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,727,604.0 | 28,050.0 | 2,187,089.0 | 8,920.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-oct-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,901,271.0 | 15,378.0 | 1,026,094.0 | 6,857.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-All | All | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,515,246,020.0 | 45,804.0 | 3,650,919.0 | 6,167.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,738,694.0 | 3,202.0 | 200,847.0 | 345.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,742.0 | 0.0 | 1.0 | 5.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-INS_50 | INS_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,740,473.0 | 3,064.0 | 199,206.0 | 413.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,733.0 | 3.0 | 7.0 | 8.0 | 0.6 | 0.7 | 1.0 | 0.5 | 0.5 | 0.5 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,921,082.0 | 125.0 | 21,536.0 | 14.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,518,942,396.0 | 7.0 | 340.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-SNPts | SNPts | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,516,724,812.0 | 25,183.0 | 2,192,748.0 | 3,138.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG006-19_DBC0_0-strobe-sentd-SNPtv | SNPtv | RIH0_ANA0-HG006-19_DBC0_0 | 2,518,942,743.0 | 2,517,892,289.0 | 14,220.0 | 1,036,234.0 | 2,244.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG006 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,812.0 | 32,399.0 | 3,681,517.0 | 44,591.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,311.0 | 2,533.0 | 201,884.0 | 1,414.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,701.0 | 3,552.0 | 199,475.0 | 1,007.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,358.0 | 224.0 | 22,146.0 | 27.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,367.0 | 15.0 | 346.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,013.0 | 16,596.0 | 2,211,119.0 | 18,847.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-clair3-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,712.0 | 9,469.0 | 1,046,547.0 | 23,294.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,801.0 | 34,472.0 | 3,679,455.0 | 3,719.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,919,932.0 | 2,651.0 | 202,145.0 | 220.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,386.0 | 3,460.0 | 199,882.0 | 184.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 3.0 | 6.0 | 0.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,948.0 | 230.0 | 21,550.0 | 30.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,386.0 | 9.0 | 333.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,030.0 | 18,211.0 | 2,209,487.0 | 2,029.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-deep-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,769.0 | 9,907.0 | 1,046,052.0 | 1,255.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | deep |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,031.0 | 557,832.0 | 3,156,865.0 | 26,149.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,498.0 | 204,230.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,742.0 | 202,986.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,875.0 | 21,853.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,369.0 | 359.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,896,401.0 | 81,929.0 | 2,146,398.0 | 14,763.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,067,796.0 | 46,465.0 | 1,010,467.0 | 11,386.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,402,076.0 | 33,400.0 | 3,689,252.0 | 32,570.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,909,443.0 | 2,027.0 | 213,258.0 | 8,923.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 3.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,903,393.0 | 2,688.0 | 218,647.0 | 1,197.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 3.0 | 6.0 | 6.0 | 0.6 | 0.7 | 1.0 | 0.5 | 0.5 | 0.5 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,109,511.0 | 108.0 | 15,109.0 | 7,220.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,696.0 | 3.0 | 29.0 | 74.0 | 0.4 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,900,330.0 | 18,485.0 | 2,205,913.0 | 9,067.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-oct-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,078,353.0 | 10,086.0 | 1,036,289.0 | 6,080.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | oct |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,411,316.0 | 32,338.0 | 3,681,074.0 | 6,429.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,006.0 | 2,385.0 | 202,337.0 | 348.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 4.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,417.0 | 2,327.0 | 200,984.0 | 351.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 2.0 | 7.0 | 2.0 | 0.8 | 0.8 | 1.0 | 0.2 | 0.8 | 0.8 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,679.0 | 125.0 | 21,924.0 | 16.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,375.0 | 2.0 | 351.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,389.0 | 17,775.0 | 2,209,564.0 | 3,466.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-bwa2a-sentd-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,069,100.0 | 9,722.0 | 1,045,906.0 | 2,242.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | bwa2a | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,821.0 | 32,027.0 | 3,681,880.0 | 43,286.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,330.0 | 2,519.0 | 201,879.0 | 1,413.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 2.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 | |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,710.0 | 3,505.0 | 199,513.0 | 999.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,387.0 | 219.0 | 22,122.0 | 28.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,369.0 | 14.0 | 345.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,896,993.0 | 16,344.0 | 2,211,391.0 | 18,688.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-clair3-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,682.0 | 9,416.0 | 1,046,630.0 | 22,156.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,804.0 | 33,389.0 | 3,680,535.0 | 4,023.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,919,938.0 | 2,642.0 | 202,148.0 | 226.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,386.0 | 3,421.0 | 199,921.0 | 193.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 3.0 | 6.0 | 0.0 | 0.8 | 0.7 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,945.0 | 230.0 | 21,553.0 | 30.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,385.0 | 10.0 | 333.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,026.0 | 17,599.0 | 2,210,103.0 | 2,202.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-deep-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,774.0 | 9,483.0 | 1,046,471.0 | 1,371.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | deep |
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,022.0 | 556,530.0 | 3,158,176.0 | 26,810.0 | 0.9 | 0.9 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,499.0 | 204,229.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,743.0 | 202,985.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,874.0 | 21,854.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,369.0 | 359.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,896,400.0 | 81,161.0 | 2,147,167.0 | 15,159.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,067,787.0 | 45,932.0 | 1,011,009.0 | 11,651.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,402,109.0 | 32,518.0 | 3,690,101.0 | 33,183.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,909,463.0 | 2,019.0 | 213,246.0 | 8,935.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 3.0 | 0.4 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,903,415.0 | 2,661.0 | 218,652.0 | 1,217.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 3.0 | 6.0 | 5.0 | 0.6 | 0.7 | 1.0 | 0.5 | 0.5 | 0.5 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,109,515.0 | 108.0 | 15,105.0 | 7,219.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,697.0 | 3.0 | 28.0 | 73.0 | 0.4 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,900,329.0 | 17,983.0 | 2,206,416.0 | 9,367.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-oct-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,078,340.0 | 9,741.0 | 1,036,647.0 | 6,364.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | oct |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,411,316.0 | 31,340.0 | 3,682,072.0 | 6,856.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,000.0 | 2,370.0 | 202,358.0 | 346.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 4.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,419.0 | 2,288.0 | 201,021.0 | 360.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 2.0 | 7.0 | 2.0 | 0.8 | 0.8 | 1.0 | 0.2 | 0.8 | 0.8 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,678.0 | 127.0 | 21,923.0 | 16.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,375.0 | 2.0 | 351.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,390.0 | 17,228.0 | 2,210,110.0 | 3,738.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-sent-sentd-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,069,104.0 | 9,323.0 | 1,046,301.0 | 2,390.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | sent | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,852.0 | 45,179.0 | 3,668,697.0 | 38,116.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,294.0 | 2,950.0 | 201,484.0 | 1,403.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 3.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 | |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,678.0 | 3,778.0 | 199,272.0 | 975.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,376.0 | 244.0 | 22,108.0 | 33.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,368.0 | 13.0 | 347.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,037.0 | 24,419.0 | 2,203,272.0 | 15,971.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-clair3-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,749.0 | 13,765.0 | 1,042,214.0 | 19,731.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | clair3 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,410,838.0 | 45,528.0 | 3,668,362.0 | 3,114.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,919,927.0 | 3,007.0 | 201,794.0 | 202.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 1.0 | 0.0 | 1.0 | 1.0 | 0.0 | 0.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep | |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,364.0 | 3,737.0 | 199,627.0 | 180.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 4.0 | 5.0 | 0.0 | 0.7 | 0.6 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,923.0 | 232.0 | 21,573.0 | 30.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,382.0 | 8.0 | 338.0 | 1.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,065.0 | 25,078.0 | 2,202,585.0 | 1,637.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-deep-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,068,827.0 | 13,461.0 | 1,042,440.0 | 1,063.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | deep |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,409,769.0 | 574,857.0 | 3,140,102.0 | 14,693.0 | 0.9 | 0.8 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,920,578.0 | 204,150.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 1.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,821.0 | 202,907.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 9.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,876.0 | 21,852.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,369.0 | 359.0 | 0.0 | 0.0 | 0.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 | ||||
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,896,259.0 | 93,219.0 | 2,135,250.0 | 7,547.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-lfq2-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,067,516.0 | 52,360.0 | 1,004,852.0 | 7,146.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | lfq2 |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,402,238.0 | 44,634.0 | 3,677,856.0 | 30,759.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,909,486.0 | 2,497.0 | 212,745.0 | 8,715.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 4.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,903,433.0 | 3,022.0 | 218,273.0 | 1,114.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,718.0 | 3.0 | 7.0 | 8.0 | 0.6 | 0.7 | 1.0 | 0.5 | 0.5 | 0.5 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,109,520.0 | 108.0 | 15,100.0 | 7,208.0 | 0.8 | 1.0 | 1.0 | 0.3 | 0.7 | 0.7 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,699.0 | 2.0 | 27.0 | 72.0 | 0.4 | 0.9 | 1.0 | 0.7 | 0.3 | 0.3 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,900,377.0 | 25,430.0 | 2,198,921.0 | 7,893.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-oct-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,078,374.0 | 13,572.0 | 1,032,782.0 | 5,745.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | oct |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-All | All | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,513,411,309.0 | 39,050.0 | 3,674,369.0 | 5,055.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-DEL_50 | DEL_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,919,999.0 | 2,517.0 | 202,212.0 | 307.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-DEL_gt50 | DEL_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,727.0 | 0.0 | 1.0 | 5.0 | 0.3 | 1.0 | 1.0 | 0.8 | 0.2 | 0.2 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-INS_50 | INS_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,921,423.0 | 2,507.0 | 200,798.0 | 306.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-INS_gt50 | INS_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,719.0 | 2.0 | 7.0 | 3.0 | 0.7 | 0.8 | 1.0 | 0.3 | 0.7 | 0.7 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-Indel_50 | Indel_50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,102,689.0 | 124.0 | 21,915.0 | 16.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-Indel_gt50 | Indel_gt50 | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,517,124,376.0 | 3.0 | 349.0 | 0.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-SNPts | SNPts | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,514,897,375.0 | 21,979.0 | 2,205,374.0 | 2,653.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
| RIH0_ANA0-HG007-19_DBC0_0-strobe-sentd-SNPtv | SNPtv | RIH0_ANA0-HG007-19_DBC0_0 | 2,517,124,728.0 | 2,516,069,097.0 | 11,918.0 | 1,043,713.0 | 1,765.0 | 1.0 | 1.0 | 1.0 | 0.0 | 1.0 | 1.0 | HG007 | wgsHC | -1.0 | -2.0 | strobe | sentd |
Coverage Eveness Metrics
Coverage Eveness Metrics.URL: https://en.wikipedia.org/wiki/Margaret_Oakley_Dayhoff
Showing 0/5 rows and 13/13 columns.
| Sample | CHRM | meanRawCov | medianRawCov | stdevRawCov | RawCovCoefofvar | NCmean | NCmedian | stdevNC | NCcoefofvar | pctEQ0 | pctLT5 | pctLT10 | aligner |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| RIH0_ANA0-HG003-19_DBC0_0 | chr22 | 24.6 | 30.0 | 49.5 | 2.0 | 0.8 | 1.0 | 1.7 | 2.0 | 0.0 | 0.0 | 0.0 | sent |
| RIH0_ANA0-HG004-19_DBC0_0 | chr22 | 24.3 | 30.0 | 21.9 | 0.9 | 0.8 | 1.0 | 0.7 | 0.9 | 0.0 | 0.0 | 0.0 | sent |
| RIH0_ANA0-HG005-19_DBC0_0 | chr22 | 24.9 | 30.0 | 46.0 | 1.9 | 0.8 | 1.0 | 1.5 | 1.9 | 0.0 | 0.0 | 0.0 | sent |
| RIH0_ANA0-HG006-19_DBC0_0 | chr22 | 28.7 | 35.0 | 32.0 | 1.1 | 0.8 | 1.0 | 0.9 | 1.1 | 0.0 | 0.0 | 0.0 | sent |
| RIH0_ANA0-HG007-19_DBC0_0 | chr22 | 26.8 | 33.0 | 22.6 | 0.8 | 0.8 | 1.0 | 0.7 | 0.8 | 0.0 | 0.0 | 0.0 | sent |
Task Benchmark Performances
Workflow Task Benchmark Results.
Showing 3605 samples.
Created with MultiQC
Software Versions
Software Versions lists versions of software tools extracted from file contents.
| Software | Version |
|---|---|
| Bcftools | 1.21 |
| FastQC | 0.11.9 |
| Samtools | 1.21 |
